RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 GAS2L1Q99501 681 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 POLR3FQ9H1D9 316 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-201ENST00000373554 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 COL6A3P12111 3177 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
HDAC8-201ENST00000373554 SLC26A4O43511 780 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 ERLIN2O94905 339 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 EYA4O95677 639 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 ZSCAN22P10073 491 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 FOSL2P15408 326 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CYP11B2P19099 503 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 ARL2P36404 184 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CAPSQ13938 189 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 BECN1Q14457 450 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 DSC3Q14574 896 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 HYIQ5T013 277 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 FAM102BQ5T8I3 360 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CABP7Q86V35 215 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 MMTAG2Q9BU76 263 aaKnown RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
HDAC8-201ENST00000373554 PCDHB7Q9Y5E2 793 aa13.34□□□□□ -0.27
HDAC8-201ENST00000373554 LINC01553A4QN01 128 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 C9IYK1 514 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 E9PMD0 336 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 DGKIO75912 1065 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 ARHGEF15O94989 841 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 GLRA2P23416 452 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 POU5F1BQ06416 359 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 BTG3Q14201 252 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 PTPAQ15257 358 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 TWF2Q6IBS0 349 aaKnown RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 FIBCD1Q8N539 461 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 TGS1Q96RS0 853 aaKnown RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 ELAC1Q9H777 363 aaKnown RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
HDAC8-201ENST00000373554 GPRC5CQ9NQ84 441 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 CHST12Q9NRB3 414 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 TMEM161AQ9NX61 479 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 MTUS1Q9ULD2 1270 aa13.33□□□□□ -0.28
HDAC8-201ENST00000373554 TTC3P53804 2025 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 LRRIQ4A6NIV6 560 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 INO80B-WBP1J3KQ70 363 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 F13A1P00488 732 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 PTENP60484 403 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 ERVK-21P61565 698 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 GRIN1Q05586 938 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 PPP2R5AQ15172 486 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 STK38Q15208 465 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 KIFAP3Q92845 792 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 ZNF689Q96CS4 500 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 PLIN2Q99541 437 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 NFKBIZQ9BYH8 718 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
HDAC8-201ENST00000373554 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-201ENST00000373554 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 HOXA2O43364 376 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 SKIP12755 728 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 TXLNAP40222 546 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-201ENST00000373554 RAB27AP51159 221 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
HDAC8-201ENST00000373554 GRB10Q13322 594 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 TMEM119Q4V9L6 283 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 PAN2Q504Q3 1202 aaKnown RBP13.31□□□□□ -0.28
HDAC8-201ENST00000373554 KCNK18Q7Z418 384 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 ZBTB8OSQ8IWT0 167 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 RNF169Q8NCN4 708 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 IFT74Q96LB3 600 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 DRC1Q96MC2 740 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 C2orf40Q9H1Z8 148 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms