RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 DHX36Q9H2U1 1008 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 WRAP73Q9P2S5 460 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 PRKAB1Q9Y478 270 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD6-202ENST00000373222 CEP350Q5VT06 3117 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TCP10L2B9ZVM9 353 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 hCG_1984214I3L0E3 225 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 AKAP3O75969 853 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 NPR1P16066 1061 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CAPN2P17655 700 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CDK17Q00537 523 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 ZSCAN26Q16670 478 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 DNAJC21Q5F1R6 531 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 TTC39BQ5VTQ0 682 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 HAUS3Q68CZ6 603 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 DPY19L2P1Q6NXN4 242 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CCDC174Q6PII3 467 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 HHIPL2Q6UWX4 724 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 CCNI2Q6ZMN8 369 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 WDR75Q8IWA0 830 aaKnown RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 ZNF713Q8N859 430 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 ZDHHC15Q96MV8 337 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 TSG101Q99816 390 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 WDR18Q9BV38 432 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 GLIS2Q9BZE0 524 aaPredicted RBP6.99□□□□□ -1.29
CHD6-202ENST00000373222 PKD2L1Q9P0L9 805 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 JRKLQ9Y4A0 524 aa6.99□□□□□ -1.29
CHD6-202ENST00000373222 YDJCA8MPS7 323 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 TACC1O75410 805 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 LCA5LO95447 670 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 CFBP00751 764 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 GLI1P08151 1106 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 FAM153BP0C7A2 387 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 NMT1P30419 496 aaKnown RBP6.98□□□□□ -1.29
CHD6-202ENST00000373222 PTK2Q05397 1052 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 ABCB5Q2M3G0 1257 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 FAM153CQ494X1 144 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 HYIQ5T013 277 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 SYCP2LQ5T4T6 812 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 TCERG1LQ5VWI1 586 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 PRPF38AQ8NAV1 312 aaKnown RBP6.98□□□□□ -1.29
CHD6-202ENST00000373222 TRIM58Q8NG06 486 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 GANQ9H2C0 597 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■■■■ 116.5
CHD6-202ENST00000373222 FBXO28Q9NVF7 368 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 FAM153AQ9UHL3 310 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 TRPC5Q9UL62 973 aaPredicted RBP6.98□□□□□ -1.29
CHD6-202ENST00000373222 PCDHGC3Q9UN70 934 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 HYOU1Q9Y4L1 999 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 SPATA31A6Q5VVP1 1343 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 ANO9A1A5B4 782 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 TISP43B9A030 160 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 PPP1R12AO14974 1030 aaPredicted RBP6.98□□□□□ -1.29
CHD6-202ENST00000373222 NT5C2P49902 561 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 CLDN10P78369 228 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 TUBB2AQ13885 445 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 KIAA0753Q2KHM9 967 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 SFMBT2Q5VUG0 894 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 MIGA2Q7L4E1 593 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 MAEAQ7L5Y9 396 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 ZNF571Q7Z3V5 609 aaPredicted RBP6.98□□□□□ -1.29
CHD6-202ENST00000373222 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 CCDC65Q8IXS2 484 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 ELMO3Q96BJ8 720 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.98□□□□□ -1.292e-8■■□□□ 11.6
CHD6-202ENST00000373222 TUBB2BQ9BVA1 445 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 CEP72Q9P209 647 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 PI4KBQ9UBF8 816 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 HDAC9Q9UKV0 1011 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 VAV3Q9UKW4 847 aa6.98□□□□□ -1.29
CHD6-202ENST00000373222 ASTN1O14525 1302 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 SOWAHBA6NEL2 793 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 USO1O60763 962 aaKnown RBP6.97□□□□□ -1.29
CHD6-202ENST00000373222 GCNT3O95395 438 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 CARSP49589 748 aaKnown RBP6.97□□□□□ -1.29
CHD6-202ENST00000373222 PSMD2Q13200 908 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 ORC2Q13416 577 aaPredicted RBP6.97□□□□□ -1.29
CHD6-202ENST00000373222 PLS1Q14651 629 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 SLC27A3Q5K4L6 730 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 CCSAPQ6IQ19 270 aaPredicted RBP6.97□□□□□ -1.29
CHD6-202ENST00000373222 TATDN1Q6P1N9 297 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 EHBP1Q8NDI1 1231 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 ZSWIM2Q8NEG5 633 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 AENQ8WTP8 325 aaKnown RBP6.97□□□□□ -1.29
CHD6-202ENST00000373222 EXOC4Q96A65 974 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 ARPC5LQ9BPX5 153 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 NT5C3AQ9H0P0 336 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
CHD6-202ENST00000373222 IGLV3-22A0A075B6J6 115 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 FRMD3A2A2Y4 597 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 GRID2IPA4D2P6 1211 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 TMEM150BA6NC51 233 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 TMCO5BA8MYB1 307 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.29
CHD6-202ENST00000373222 LGR5O75473 907 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 APBA3O96018 575 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 GCFC2P16383 781 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms