RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 KRT35Q92764 455 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 PAIP2Q9BPZ3 127 aaKnown RBP12.94□□□□□ -0.34
SNX21-205ENST00000372547 ZNF287Q9HBT7 754 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
SNX21-205ENST00000372547 TMEM120BA0PK00 339 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 AGTP01019 485 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 NR3C1P04150 777 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 BTDP43251 543 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 PLS1Q14651 629 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 DRAP1Q14919 205 aaPredicted RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 SEPT2Q15019 361 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 TNIP1Q15025 636 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 ARMC2Q8NEN0 867 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 TBC1D22AQ8WUA7 517 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 L3MBTL3Q96JM7 780 aaPredicted RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 SIX2Q9NPC8 291 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 ANKRD63C9JTQ0 380 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 SUN1O94901 812 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 GH1P01241 217 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 FERP16591 822 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 PRKCIP41743 596 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 COPS2P61201 443 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 BIRC2Q13490 618 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 MESDQ14696 234 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 DDB1Q16531 1140 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 DPY19L2P1Q6NXN4 242 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 CCDC137Q6PK04 289 aaKnown RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
SNX21-205ENST00000372547 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 DNAJC12Q9UKB3 198 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 COG5Q9UP83 839 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
SNX21-205ENST00000372547 RIPK2O43353 540 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 MSH2P43246 934 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 SARNPP82979 210 aaKnown RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 ZNF268Q14587 947 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 KCTD1Q719H9 257 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 SLC35C1Q96A29 364 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 GRHL1Q9NZI5 618 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 LAMB1P07942 1786 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 HOXD13P35453 343 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 ATP11AP98196 1134 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 ORC2Q13416 577 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 SNX1Q13596 522 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 TAF11Q15544 211 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 TTC27Q6P3X3 843 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 ADGRF4Q8IZF3 695 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 FITM2Q8N6M3 262 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 ZBTB10Q96DT7 871 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 HOMER3Q9NSC5 361 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 USP40Q9NVE5 1235 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 KIAA1551Q9HCM1 1747 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 PPP1R11O60927 126 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 RIPK1Q13546 671 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 TRIP13Q15645 432 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 PRR16Q569H4 304 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
SNX21-205ENST00000372547 CARD9Q9H257 536 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
SNX21-205ENST00000372547 RREB1Q92766 1687 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 A0A0A6YYK5 440 aaPredicted RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 ESYT2A0FGR8 921 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 CCND1P24385 295 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SOX5P35711 763 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 VPS41P49754 854 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 CYP2J2P51589 502 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 JAM2P57087 298 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms