RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 KRT38O76015 456 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 WFS1O76024 890 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 IGFBP4P22692 258 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 RFC4P35249 363 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 PSMD7P51665 324 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 OXCT1P55809 520 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 HDAC4P56524 1084 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 RAB15P59190 212 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 ITIH3Q06033 890 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 KLC1Q07866 573 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 RNF220Q5VTB9 566 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 TMEM154Q6P9G4 183 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 TBC1D1Q86TI0 1168 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 SLC15A3Q8IY34 581 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 STAG2Q8N3U4 1231 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 MREGQ8N565 214 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 CCDC51Q96ER9 411 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 ARHGEF10LQ9HCE6 1279 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 DCP1AQ9NPI6 582 aaPredicted RBP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 ATP8A2Q9NTI2 1148 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
ATG4A-203ENST00000372232 BTAF1O14981 1849 aa9.59□□□□□ -0.87
ATG4A-203ENST00000372232 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 E7ENQ6 273 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 ORC4O43929 436 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 BCRP11274 1271 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 TROAPQ12815 778 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 NR5A1Q13285 461 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 NR1I3Q14994 352 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 FOXB2Q5VYV0 432 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 OLFM4Q6UX06 510 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF572Q7Z3I7 529 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-203ENST00000372232 CATIPQ7Z7H3 387 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 CITED4Q96RK1 184 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 RPS6KC1Q96S38 1066 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 FAM192AQ9GZU8 254 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 TAF1DQ9H5J8 278 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-203ENST00000372232 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
ATG4A-203ENST00000372232 GABBR1Q9UBS5 961 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 TMED5Q9Y3A6 229 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 DUOX1Q9NRD9 1551 aa9.58□□□□□ -0.88
ATG4A-203ENST00000372232 A0A1W2PRU2 124 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 EIF4E1BA6NMX2 242 aaKnown RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 RIMBP2O15034 1052 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 MFAP3LO75121 409 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ATF4P18848 351 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ALDH5A1P51649 535 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 PLOD1Q02809 727 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 SULT2A1Q06520 285 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 PAK2Q13177 524 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 NFIXQ14938 502 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 COX20Q5RI15 118 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CFAP58Q5T655 872 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 KRT27Q7Z3Y8 459 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 SLF1Q9BQI6 1058 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ZNHIT6Q9NWK9 470 aaKnown RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 KCNH3Q9ULD8 1083 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ECM29Q5VYK3 1845 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 PRPF3O43395 683 aaKnown RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 PFDN1O60925 122 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 DDAH1O94760 285 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ATP1A1P05023 1023 aaKnown RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CALM1P0DP23 149 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CALM2P0DP24 149 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CALM3P0DP25 149 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ACADSP16219 412 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 GNAZP19086 355 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 DRD4P21917 467 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 LMNB2Q03252 620 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ORC1Q13415 861 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 GRAPQ13588 217 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ITIH4Q14624 930 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 USH1GQ495M9 461 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 SH2D4BQ5SQS7 431 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 TRIM68Q6AZZ1 485 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CACNA2D4Q7Z3S7 1137 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 TMTC1Q8IUR5 882 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ALKBH8Q96BT7 664 aaKnown RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF653Q96CK0 615 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 DCBLD2Q96PD2 775 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 ARPP21Q9UBL0 812 aaPredicted RBP9.57□□□□□ -0.88
ATG4A-203ENST00000372232 JAG2Q9Y219 1238 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 CASZ1Q86V15 1759 aa9.57□□□□□ -0.88
ATG4A-203ENST00000372232 PDE2AO00408 941 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PLEKHA8P1O95397 391 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 XBP1P17861 261 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 HOXA10P31260 410 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms