RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TOPORSQ9NS56 1045 aaPredicted RBP14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.12
RAPGEF1-201ENST00000372189 MYO1FO00160 1098 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 SLC4A1P02730 911 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 MAGEA9P43362 315 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 AGBL3Q8NEM8 1001 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 GTF3C2Q8WUA4 911 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 THAP9Q9H5L6 903 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 KIF9Q9HAQ2 790 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 TSPAN9O75954 239 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 KAZNQ674X7 775 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 TRIM42Q8IWZ5 723 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 THNSL1Q8IYQ7 743 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 GABBR1Q9UBS5 961 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF711Q9Y462 761 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 CELF2O95319 508 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 CD58P19256 250 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 NR1D1P20393 614 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCNE1P24864 410 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANLNQ9NQW6 1124 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF148Q9UQR1 794 aa14.27□□□□□ -0.13
RAPGEF1-201ENST00000372189 POTEMA6NI47 508 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 EIF3CLB5ME19 914 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 PFDN6O15212 129 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 LRRN2O75325 713 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 TGFB2P61812 414 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 CCDC15Q0P6D6 951 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 EIF3CQ99613 913 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 TLK1Q9UKI8 766 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 PSMA4P25789 261 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 GARSP41250 739 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 SHQ1Q6PI26 577 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 HNRNPCL2B2RXH8 293 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 CLDN3O15551 220 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 HNRNPCL1O60812 293 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 XPAP23025 273 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 ATP8A1Q9Y2Q0 1164 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 DDX42Q86XP3 938 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 FBXO41Q8TF61 875 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 NHEJ1Q9H9Q4 299 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 PTPN22Q9Y2R2 807 aa14.26□□□□□ -0.13
RAPGEF1-201ENST00000372189 MOCS3O95396 460 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 GYS1P13807 737 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 EIF3BP55884 814 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF653Q96CK0 615 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 NDUFA10O95299 355 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 CETPP11597 493 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 KRT3P12035 628 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZBED6P86452 979 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 OR6J1Q8NGC5 347 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 POC1B-GALNT4F8VUJ3 575 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 GOLGA8SH3BPF8 625 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 H7C0C1 242 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 HSPA6P17066 643 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 ATP5OP48047 213 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 SCOCQ9UIL1 159 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 KRT10P13645 584 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 HUNKP57058 714 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 PSMC5P62195 406 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 SREBF2Q12772 1141 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 FAPQ12884 760 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 TAF11Q15544 211 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 RAD54LQ92698 747 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 IPO5O00410 1097 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 MAPK4P31152 587 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 DHX9Q08211 1270 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 MESDQ14696 234 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 OR6B3Q8NGW1 331 aa14.25□□□□□ -0.13
RAPGEF1-201ENST00000372189 INHBAP08476 426 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 CDC27P30260 824 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 TMED10P49755 219 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ZNF568Q3ZCX4 644 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANKRD20A4Q4UJ75 823 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANKRD20A8PQ5CZ79 823 aa14.24□□□□□ -0.13
RAPGEF1-201ENST00000372189 ANKRD20A2Q5SQ80 823 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms