RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 HACL1Q9UJ83 578 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 HIP1RO75146 1068 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 FGGP02679 453 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 AKR1B1P15121 316 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 MCPH1Q8NEM0 835 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 RNF25Q96BH1 459 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 MRPL4Q9BYD3 311 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 DYRK4Q9NR20 520 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 NDFIP2Q9NV92 336 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 UBA6A0AVT1 1052 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 CHEK2O96017 543 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 GNA15P30679 374 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 KPNA2P52292 529 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 VCPP55072 806 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 POU5F1BQ06416 359 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 IFT88Q13099 833 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 ARHGEF5Q12774 1597 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PRPF4O43172 522 aaKnown RBP eCLIP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 DYNC1LI2O43237 492 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 DNAJC6O75061 913 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 NFKBIAP25963 317 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CCT5P48643 541 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RBBP7Q16576 425 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 IMPG1Q17R60 797 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 STAG2Q8N3U4 1231 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 KLC2Q9H0B6 622 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 USH1CQ9Y6N9 552 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 SUN1O94901 812 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CLEC10AQ8IUN9 316 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RNF149Q8NC42 400 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 DHX38Q92620 1227 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ATXN7L3BQ96GX2 97 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ASNSD1Q9NWL6 643 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 GTSE1Q9NYZ3 720 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 KDM6BO15054 1643 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PPFIA2O75334 1257 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PALMO75781 387 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TDP2O95551 362 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 VAMP7P51809 220 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RWDD2BP57060 319 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RASSF3Q86WH2 238 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 XXYLT1Q8NBI6 393 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 EIF2AK1Q9BQI3 630 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 Q9H521 79 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 GPBP1L1Q9HC44 474 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 SLC4A7Q9Y6M7 1214 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 SCINQ9Y6U3 715 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 HNRNPCL2B2RXH8 293 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 MAP3K7O43318 606 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 HNRNPCL1O60812 293 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TADA2AO75478 443 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PSMC1P62191 440 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 KRT76Q01546 638 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 LRRC63Q05C16 580 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ZSCAN26Q16670 478 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 HIPK4Q8NE63 616 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CDC23Q9UJX2 597 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 OVOS2A0A0G2JMS6 1433 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 F8W8V4 182 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CELF2O95319 508 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ANP32DO95626 131 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 HSPA4LO95757 839 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 SYF2O95926 243 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ATP1A3P13637 1013 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 EEF1B2P24534 225 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RESTQ13127 1097 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TBCCQ15814 346 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CENPUQ71F23 418 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TTC17Q96AE7 1141 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 PBKQ96KB5 322 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 XAB2Q9HCS7 855 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 SLC9A2Q9UBY0 812 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 GOLGA8QA0A0J9YX86 632 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 GOLGA8OA6NCC3 632 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 GOLGA8NF8WBI6 632 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 NDUFA10O95299 355 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 LIFRP42702 1097 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CCDC157Q569K6 752 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 THEMIS2Q5TEJ8 643 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 ALKBH5Q6P6C2 394 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 TMEM143Q96AN5 459 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 NUP85Q9BW27 656 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 MAP3K20Q9NYL2 800 aaKnown RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 RBAKQ9NYW8 714 aaPredicted RBP9.13□□□□□ -0.95
ABCA4-201ENST00000370225 CLCA2Q9UQC9 943 aa9.13□□□□□ -0.95
ABCA4-201ENST00000370225 H3BRJ5 948 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 BTBD8Q5XKL5 378 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 LDHDQ86WU2 507 aa9.12□□□□□ -0.95
ABCA4-201ENST00000370225 SPATA2LQ8IUW3 424 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-201ENST00000370225 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms