RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 A0A1W2PRX2 142 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 FAM20BO75063 409 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 MYCLP1P12525 358 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 KRT15P19012 456 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 PTGS1P23219 599 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 LACTBP83111 547 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 ABHD17CQ6PCB6 329 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 THNSL2Q86YJ6 484 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 UBR7Q8N806 425 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 IGSF22Q8N9C0 903 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 TARS2Q9BW92 718 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 CELF4Q9BZC1 486 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 INCENPQ9NQS7 918 aa4.93□□□□□ -1.62
ECHDC1-201ENST00000368287 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 KCNA6P17658 529 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 NEK4P51957 841 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 PTPAQ15257 358 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 CFAP100Q494V2 611 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 ZCCHC8Q6NZY4 707 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 CNNM4Q6P4Q7 775 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 GSPT2Q8IYD1 628 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 AHI1Q8N157 1196 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 WDR48Q8TAF3 677 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 LENG9Q96B70 501 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 WNK4Q96J92 1243 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 CABP5Q9NP86 173 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 RIC8BQ9NVN3 520 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 GALNT8Q9NY28 637 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 SAMD15Q9P1V8 674 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 Q9UFV3 132 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 CBLCQ9ULV8 474 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 COQ6Q9Y2Z9 468 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 ATP23Q9Y6H3 246 aa4.92□□□□□ -1.62
ECHDC1-201ENST00000368287 GSG1L2A8MUP6 293 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 PDE8AO60658 829 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 DNAJC6O75061 913 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 JMJD7P0C870 316 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 POU3F3P20264 500 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 JAM2P57087 298 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 AMPD3Q01432 767 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 PCBP1Q15365 356 aaKnown RBP eCLIP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 STILQ15468 1287 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 LY6G5CQ5SRR4 150 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 RNF180Q86T96 592 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 PTRH1Q86Y79 214 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 ZNF276Q8N554 614 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 CISD2Q8N5K1 135 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 PROKR1Q8TCW9 393 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 MLST8Q9BVC4 326 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 GPR87Q9BY21 358 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 MTFR1LQ9H019 292 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
ECHDC1-201ENST00000368287 SLC12A8A0AV02 714 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 VIL1P09327 827 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 STAT5BP51692 787 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 CD83Q01151 205 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 SEPT7Q16181 437 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 PTPROQ16827 1216 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 FIGNQ5HY92 759 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 RNF187Q5TA31 235 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 PIK3R6Q5UE93 754 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 CDCA2Q69YH5 1023 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 TMEM200BQ69YZ2 307 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 RHOUQ7L0Q8 258 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 OVCH1Q7RTY7 1134 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 PPM1KQ8N3J5 372 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 TMX1Q9H3N1 280 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 SRPK3Q9UPE1 567 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 ZKSCAN5Q9Y2L8 839 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
ECHDC1-201ENST00000368287 TCRBV5S4A2TA0A5A2 114 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 M0R2C6 588 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 MAN2B1O00754 1011 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 KPNA6O60684 536 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 HIP1RO75146 1068 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 ABHD16AO95870 558 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 AMY2AP04746 511 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 AMY2BP19961 511 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 STAT3P40763 770 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 SART3Q15020 963 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 RABL3Q5HYI8 236 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 HECTD2Q5U5R9 776 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 KCNV1Q6PIU1 500 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 STRA8Q7Z7C7 330 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 SH3RF2Q8TEC5 729 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 RABGGTAQ92696 567 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 BTBD2Q9BX70 525 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 COL4A3BPQ9Y5P4 624 aa4.89□□□□□ -1.63
ECHDC1-201ENST00000368287 FAM90A27PA6NNH2 459 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 KIAA0355O15063 1070 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 CLASP2O75122 1294 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 GLRX3O76003 335 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms