RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.9□□□□□ -0.666e-7■■□□□ 12.3
TULP4-201ENST00000367094 TRIM9Q9C026 710 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 INTS2Q9H0H0 1204 aaKnown RBP10.9□□□□□ -0.66
TULP4-201ENST00000367094 DONSONQ9NYP3 566 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 SORBS3O60504 671 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 NTSR2O95665 410 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 LIG3P49916 1009 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 KCNQ4P56696 695 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 GPR101Q96P66 508 aaPredicted RBP10.9□□□□□ -0.66
TULP4-201ENST00000367094 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
TULP4-201ENST00000367094 SETD1BQ9UPS6 1966 aaKnown RBP10.9□□□□□ -0.67
TULP4-201ENST00000367094 EXOC1LA0A1B0GW35 172 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L15C9J2P7 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L13C9JLJ4 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L11C9JVI0 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L18D6R9N7 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L22D6RA61 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L17D6RBQ6 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L19D6RCP7 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L20D6RJB6 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 GOLGA8SH3BPF8 625 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ZMYND10O75800 440 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 SRGNP10124 158 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 PPARGP37231 505 aaPredicted RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 ANTXR2P58335 489 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ZNF543Q08ER8 600 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L24Q0WX57 530 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 NFIXQ14938 502 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ATG16L1Q676U5 607 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 USP17L6PQ6QN14 398 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 FBXO33Q7Z6M2 555 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 BANK1Q8NDB2 785 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 TEX12Q9BXU0 123 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 CNOT8Q9UFF9 292 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 A0A1W2PQJ5 194 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 SPDYE16A6NNV3 312 aaPredicted RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 PHKA2P46019 1235 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 TMED2Q15363 201 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 TRIM68Q6AZZ1 485 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 PDCD7Q8N8D1 485 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 MTRQ99707 1265 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 NFU1Q9UMS0 254 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 IFRD2Q12894 506 aaPredicted RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 IFT88Q13099 833 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 SNX1Q13596 522 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 DHX34Q14147 1143 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 TKFCQ3LXA3 575 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 STRIP1Q5VSL9 837 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 RFFLQ8WZ73 363 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 CEP19Q96LK0 163 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 LRRC4Q9HBW1 653 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ECE1P42892 770 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 MAPK6Q16659 721 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 EDRF1Q3B7T1 1238 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 ARL13BQ3SXY8 428 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 KRT80Q6KB66 452 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
TULP4-201ENST00000367094 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
TULP4-201ENST00000367094 HGSO14964 777 aaPredicted RBP10.88□□□□□ -0.67
TULP4-201ENST00000367094 EFCAB14O75071 495 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
TULP4-201ENST00000367094 TERF2Q15554 542 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 LRRC23Q53EV4 343 aaPredicted RBP10.88□□□□□ -0.67
TULP4-201ENST00000367094 RASGRP2Q7LDG7 609 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 CENPKQ9BS16 269 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 TDRD3Q9H7E2 651 aaKnown RBP10.88□□□□□ -0.67
TULP4-201ENST00000367094 ASNSD1Q9NWL6 643 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 PLAAQ9Y263 795 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 FLT1P17948 1338 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 AFF2P51816 1311 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 SPATA31A6Q5VVP1 1343 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 RGL2O15211 777 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 TEX33O43247 280 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 ARHGEF9O43307 516 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 AKR1B1P15121 316 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 SOX5P35711 763 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 ARL4CP56559 192 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 TAF11Q15544 211 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 MIGA2Q7L4E1 593 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 SLC13A4Q9UKG4 626 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 NWD1Q149M9 1564 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 SNAP23O00161 211 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 CLDN3O15551 220 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 ZRANB2O95218 330 aaKnown RBP eCLIP10.88□□□□□ -0.67
TULP4-201ENST00000367094 TDP2O95551 362 aa10.88□□□□□ -0.67
TULP4-201ENST00000367094 GUCY1A2P33402 732 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms