RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 CLLU1OSQ5K130 101 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 LARP1BQ659C4 914 aaKnown RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 CATSPER4Q7RTX7 472 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 KCNK18Q7Z418 384 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 CATSPER3Q86XQ3 398 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 NPAS4Q8IUM7 802 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 C4orf19Q8IY42 314 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 TMEM192Q8IY95 271 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 CRIPAKQ8N1N5 446 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 NME8Q8N427 588 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 FIBCD1Q8N539 461 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 RNF149Q8NC42 400 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 HELQQ8TDG4 1101 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 SNX29Q8TEQ0 813 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 LRRC15Q8TF66 581 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 PRPF31Q8WWY3 499 aaKnown RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 SLC7A3Q8WY07 619 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 CPB2Q96IY4 423 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 CCDC43Q96MW1 224 aaKnown RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 MTRQ99707 1265 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 HSD17B14Q9BPX1 270 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 KIFC3Q9BVG8 833 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 POLR3FQ9H1D9 316 aaPredicted RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZSWIM4Q9H7M6 989 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 ATP6V0A4Q9HBG4 840 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 IFT122Q9HBG6 1241 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 ALG13Q9NP73 1137 aaKnown RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 LRFN2Q9ULH4 789 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 PIN4Q9Y237 131 aaKnown RBP3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 INSL6Q9Y581 213 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 COL4A3BPQ9Y5P4 624 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 SQORQ9Y6N5 450 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 C2orf16Q68DN1 1984 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 VCANP13611 3396 aa3.88□□□□□ -1.79
RNU4-35P-201ENST00000362588 ARHGEF35A5YM69 484 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 LRRIQ4A6NIV6 560 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 TTLL13PA6NNM8 815 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 NT5C1B-RDH14C9J2C7 533 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 INO80B-WBP1J3KQ70 363 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 GPR182O15218 404 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 GTPBP6O43824 516 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 B4GALT3O60512 393 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DKC1O60832 514 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DGAT1O75907 488 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 LYPLA2O95372 231 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RPLP2P05387 115 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ITGB1P05556 798 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 STAG3L1P0CL83 205 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZSCAN20P17040 1043 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 SYT1P21579 422 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 SFPQP23246 707 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DNAJB1P25685 340 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 IRS1P35568 1242 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RFC5P40937 340 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MCM2P49736 904 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DNM2P50570 870 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 FXR2P51116 673 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 KCNQ1P51787 676 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ATP2C1P98194 919 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 CEBPZQ03701 1054 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MBTD1Q05BQ5 628 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RAD51AP2Q09MP3 1159 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RESTQ13127 1097 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 GPM6BQ13491 265 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 DHX8Q14562 1220 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 SF3A1Q15459 793 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 FOXD4L6Q3SYB3 417 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 SPECC1Q5M775 1068 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 UBXN11Q5T124 520 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 SPOUT1Q5T280 376 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 TWF2Q6IBS0 349 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 PADI6Q6TGC4 694 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 FOXD4L3Q6VB84 417 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 LRRC55Q6ZSA7 311 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 EP400NLQ6ZTU2 488 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 OTUD6AQ7L8S5 288 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ADGRD2Q7Z7M1 963 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ZNF410Q86VK4 478 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 ECHDC2Q86YB7 292 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 IGSF22Q8N9C0 903 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 KLHL23Q8NBE8 558 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 NEK9Q8TD19 979 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 PSPC1Q8WXF1 523 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 CHAMP1Q96JM3 812 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 NECAB3Q96P71 396 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 PNMA5Q96PV4 448 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 MMTAG2Q9BU76 263 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 POLR3CQ9BUI4 534 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RUSC1Q9BVN2 902 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 APOL6Q9BWW8 343 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 FTHL17Q9BXU8 183 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 EIF2AQ9BY44 585 aaKnown RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 GCOM2Q9BZD3 368 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 INO80BQ9C086 356 aaPredicted RBP3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 GBP3Q9H0R5 595 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 BHMT2Q9H2M3 363 aa3.87□□□□□ -1.79
RNU4-35P-201ENST00000362588 RNF39Q9H2S5 420 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms