RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 FBXO40Q9UH90 709 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 PHKA2P46019 1235 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 PEX3P56589 373 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 CDO1Q16878 200 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 SYDE1Q6ZW31 735 aaPredicted RBP11.3□□□□□ -0.6
HIPK1-202ENST00000361587 MMTAG2Q9BU76 263 aaKnown RBP11.3□□□□□ -0.6
HIPK1-202ENST00000361587 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
HIPK1-202ENST00000361587 COG4Q9H9E3 785 aa11.3□□□□□ -0.6
HIPK1-202ENST00000361587 AP3B1O00203 1094 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ESRRBO95718 433 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ZNF699Q32M78 642 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 RARS2Q5T160 578 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 STAMBPL1Q96FJ0 436 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 EDEM3Q9BZQ6 932 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 GGCXP38435 758 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 IREB2P48200 963 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 MED21Q13503 144 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 PTK2BQ14289 1009 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ZNF564Q8TBZ8 553 aaPredicted RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ULK4Q96C45 1275 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ATP6V1G3Q96LB4 118 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ANTXR1Q9H6X2 564 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 GTPBP10A4D1E9 387 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 PRKAB2O43741 272 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 MYO1DO94832 1006 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 SFNP31947 248 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 KRT76Q01546 638 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 KYAT1Q16773 422 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 RNF103-CHMP3A0A140T963 221 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 LRRC53A6NM62 1247 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ATP1A3P13637 1013 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ARPP19P56211 112 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 VPS11Q9H270 941 aa11.29□□□□□ -0.6
HIPK1-202ENST00000361587 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
HIPK1-202ENST00000361587 RAP1GDS1P52306 607 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 ZBTB5O15062 677 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 CLDN3O15551 220 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 SDC4P31431 198 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 SERPINB10P48595 397 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PCYT1AP49585 367 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 GPC3P51654 580 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 OSTNP61366 133 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 TSPY1Q01534 308 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 MAPK6Q16659 721 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 STX19Q8N4C7 294 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 ECT2Q9H8V3 914 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 SUFUQ9UMX1 484 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 FNDC3AQ9Y2H6 1198 aaKnown RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 A0A1W2PQC6 194 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 KRT8P05787 483 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 ROR1Q01973 937 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 MECOMQ03112 1051 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PTPN12Q05209 780 aaKnown RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 TRADDQ15628 312 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 RHOT1Q8IXI2 618 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PIK3R2O00459 728 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PARP9Q8IXQ6 854 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 WWP1Q9H0M0 922 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 HACD3Q9P035 362 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 HUS1O60921 280 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 CDC25AP30304 524 aa11.28□□□□□ -0.6
HIPK1-202ENST00000361587 GRAPQ13588 217 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms