RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EFHD1Q9BUP0 239 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 SENP2Q9HC62 589 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 ANKFY1Q9P2R3 1169 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 SCINQ9Y6U3 715 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 UTYO14607 1347 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 SAT1P21673 171 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 ART3Q13508 389 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 ANO3Q9BYT9 981 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 PFASO15067 1338 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 PDHBP11177 359 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 ECE1P42892 770 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 STAT4Q14765 748 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 SLC35G2Q8TBE7 412 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 KMT5AQ9NQR1 393 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 KRT3P12035 628 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 ANXA13P27216 316 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 ORC4O43929 436 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 AARSP49588 968 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMC5-201ENST00000361138 UBXN2AP68543 259 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 TBC1D10BQ4KMP7 808 aaPredicted RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 BRDTQ58F21 947 aaPredicted RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 DDX42Q86XP3 938 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMC5-201ENST00000361138 MDM1Q8TC05 714 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 DNAJC9Q8WXX5 260 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 STAMBPL1Q96FJ0 436 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 LPXNO60711 386 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 KITP10721 976 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 CRKLP46109 303 aaKnown RBP14.92□□□□□ -0.02
SMC5-201ENST00000361138 RAPH1Q70E73 1250 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 C1orf54Q8WWF1 131 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 WDR17Q8IZU2 1322 aa14.92□□□□□ -0.02
SMC5-201ENST00000361138 MRPS35P82673 323 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 RBM41Q96IZ5 413 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 KCNA3P22001 575 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 TTC1Q99614 292 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 KIF9Q9HAQ2 790 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 APOBEC2Q9Y235 224 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 NQO1P15559 274 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 CNPY4Q8N129 248 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 NEXMIFQ5QGS0 1516 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 POTEB3A0JP26 581 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 A6NJR5 290 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 POTECB2RU33 542 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 CFLARO15519 480 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 KRT37O76014 449 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 POTEBQ6S5H4 581 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 SYDE1Q6ZW31 735 aaPredicted RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 WDR75Q8IWA0 830 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 ICA1LQ8NDH6 482 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 CXorf38Q8TB03 319 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 ERGIC2Q96RQ1 377 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 ATP6V1G2O95670 118 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 ZNF18P17022 549 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
SMC5-201ENST00000361138 RFX8Q6ZV50 586 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 CCDC125Q86Z20 511 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 SDCCAG3Q96C92 435 aa14.91□□□□□ -0.02
SMC5-201ENST00000361138 GOLGA8SH3BPF8 625 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 GOLGA8MH3BSY2 632 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 ANP32DO95626 131 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 KRT39Q6A163 491 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 PPP1R18Q6NYC8 613 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 SYN2Q92777 582 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 ROPN1BQ9BZX4 212 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 ROPN1Q9HAT0 212 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 ATP6V0A4Q9HBG4 840 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 TTLL3Q9Y4R7 772 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 GOLGA8IPA6NC78 632 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 GOLGA8JA6NMD2 632 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 RFX1P22670 979 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 IZUMO3Q5VZ72 239 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 LRRC34Q8IZ02 419 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 CCDC17Q96LX7 622 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 TRAF3IP3Q9Y228 551 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 LEMD3Q9Y2U8 911 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 PLEKP08567 350 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 APLFQ8IW19 511 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 SLC4A7Q9Y6M7 1214 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 DUSP10Q9Y6W6 482 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 NRXN1Q9ULB1 1477 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 GPC4O75487 556 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 PGM1P36871 562 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 STK4Q13043 487 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 CUL3Q13618 768 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 PDCD2Q16342 344 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 CELF4Q9BZC1 486 aaKnown RBP14.9□□□□□ -0.02
SMC5-201ENST00000361138 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 CPS1P31327 1500 aa14.9□□□□□ -0.02
SMC5-201ENST00000361138 XDHP47989 1333 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms