RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ST13P50502 369 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CYP27A1Q02318 531 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 MAPRE2Q15555 327 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 TMC5Q6UXY8 1006 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CYGBQ8WWM9 190 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 SRPK1Q96SB4 655 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 UBAP1Q9NZ09 502 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 TCP11X1B4DZS4 312 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ZFP42Q96MM3 310 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 PALMO75781 387 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 GRK2P25098 689 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 UBE4BO95155 1302 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ANP32DO95626 131 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 SCRN1Q12765 414 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRC14Q15048 493 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 DDHD1Q8NEL9 900 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 AMNQ9BXJ7 453 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CARMIL3Q8ND23 1372 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ZNF532Q9HCE3 1301 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 NFIBO00712 420 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 KLHL25Q9H0H3 589 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 TMEM191CA6NGB0 347 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 SCP2P22307 547 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 HIF1AQ16665 826 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ERICH1Q86X53 443 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
SRGAP3-201ENST00000360413 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 FOXP2O15409 715 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 APOA4P06727 396 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 UBTFL6P0CB48 400 aaPredicted RBP14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 BAG6P46379 1132 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 RAD51Q06609 339 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 TBC1D9BQ66K14 1250 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT27Q7Z3Y8 459 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 SEL1LQ9UBV2 794 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC142Q17RM4 750 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 ZNF473Q8WTR7 871 aaKnown RBP14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 FAM149B1Q96BN6 582 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 SIKE1Q9BRV8 207 aa14.02□□□□□ -0.16
SRGAP3-201ENST00000360413 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF18P17022 549 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ERFP50548 548 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 NAIF1Q69YI7 327 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 PARVBQ9HBI1 364 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 GGT7Q9UJ14 662 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 BTBD18B2RXH4 712 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ARIH2O95376 493 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 BRAFP15056 766 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 APLFQ8IW19 511 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ULK4Q96C45 1275 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 TMEM245Q9H330 911 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 SNTNA6NMZ2 147 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 NEMP1O14524 444 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 TNIP2Q8NFZ5 429 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 FAM135BQ49AJ0 1406 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 C16orf96A6NNT2 1141 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 NCAPG2Q86XI2 1143 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF513Q8N8E2 541 aaPredicted RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 PBXIP1Q96AQ6 731 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 FAF2Q96CS3 445 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 DYRK4Q9NR20 520 aa14.02□□□□□ -0.17
SRGAP3-201ENST00000360413 E5RI56 91 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 M0R3G1 203 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ZBED1O96006 694 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ARL4CP56559 192 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 SPATA17Q96L03 361 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PRPF18Q99633 342 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 CCT7Q99832 543 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PIK3R2O00459 728 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ZNF197O14709 1029 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 TBC1D4O60343 1298 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 PRAMEP78395 509 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 ARID5BQ14865 1188 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 SLITRK6Q9H5Y7 841 aa14.01□□□□□ -0.17
SRGAP3-201ENST00000360413 MFAP3LO75121 409 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms