RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 SPARCL1Q14515 664 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 LRRC14Q15048 493 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ALFQ53S48 1182 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 TTC23LQ6PF05 361 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 TMEM206Q9H813 350 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 GTF2A1LQ9UNN4 478 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ATP9BO43861 1147 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 PRAMEP78395 509 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ASCC2Q9H1I8 757 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 KLHL11Q9NVR0 708 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 RFX3P48380 749 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 OTUB1Q96FW1 271 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 ABCB11O95342 1321 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 KCNQ3O43525 872 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 PALMO75781 387 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 SMARCA1P28370 1054 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 NR5A1Q13285 461 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ZNF658Q5TYW1 1059 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 LRRC31Q6UY01 552 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 C11orf57Q6ZUT1 292 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 PPM1NQ8N819 430 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 USP6NLQ92738 828 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 PBKQ96KB5 322 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 DMAP1Q9NPF5 467 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 HMBSP08397 361 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 TADA2BQ86TJ2 420 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 CDC23Q9UJX2 597 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
FXR1-202ENST00000357559 CMA1P23946 247 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 TMEM270Q6UE05 265 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 SLC17A8Q8NDX2 589 aa11.22□□□□□ -0.61
FXR1-202ENST00000357559 GOLGA8RI6L899 631 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 GRIK1P39086 918 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 NEK9Q8TD19 979 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 CYTH3O43739 400 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 EPB42P16452 691 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 SOAT1P35610 550 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 TSC22D1Q15714 1073 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 ALS2CLQ60I27 953 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.61
FXR1-202ENST00000357559 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 M0QYV0 167 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 MAP4P27816 1152 aaKnown RBP11.21□□□□□ -0.61
FXR1-202ENST00000357559 GPS1Q13098 491 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 MAN2A1Q16706 1144 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 TMA16Q96EY4 203 aaKnown RBP11.21□□□□□ -0.61
FXR1-202ENST00000357559 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
FXR1-202ENST00000357559 C5orf58C9J3I9 102 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 BMP3P12645 472 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 AP2B1P63010 937 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 CNOT10Q9H9A5 744 aaKnown RBP11.21□□□□□ -0.61
FXR1-202ENST00000357559 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
FXR1-202ENST00000357559 UPP2O95045 317 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 CPB1P15086 417 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 USP14P54578 494 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 PLD3Q8IV08 490 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 KDM5AP29375 1690 aaKnown RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 AGRPO00253 132 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 CACNB3P54284 484 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 HDAC4P56524 1084 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 UBE4BO95155 1302 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 RASSF10A6NK89 507 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 CHRNA3P32297 505 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 CSE1LP55060 971 aaKnown RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 ZNF211Q13398 564 aaPredicted RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 CUL3Q13618 768 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 SGO1Q5FBB7 561 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.62
FXR1-202ENST00000357559 DONSONQ9NYP3 566 aa11.21□□□□□ -0.62
FXR1-202ENST00000357559 DAB1O75553 588 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 IL31Q6EBC2 164 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
FXR1-202ENST00000357559 PRKAB2O43741 272 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 DEUP1Q05D60 604 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 PCDHGB4Q9UN71 923 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 ABCC12Q96J65 1359 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 ATP5JP18859 108 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 IYDQ6PHW0 289 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 IL1RL2Q9HB29 575 aa11.2□□□□□ -0.62
FXR1-202ENST00000357559 COPG1Q9Y678 874 aaKnown RBP11.2□□□□□ -0.62
FXR1-202ENST00000357559 TLR2O60603 784 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms