RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FRMD3A2A2Y4 597 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 CEP104O60308 925 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 FMO5P49326 533 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 FIGNQ5HY92 759 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 CBWD2Q8IUF1 395 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 AP1M1Q9BXS5 423 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 R3HDMLQ9H3Y0 253 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 LUC7LQ9NQ29 371 aaKnown RBP15.12■□□□□ 0.01
TRIM4-201ENST00000349062 RNF181Q9P0P0 153 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 DENND3A2RUS2 1198 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 STAT1P42224 750 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 HSD17B4P51659 736 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 SEMA3FQ13275 785 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 CASP8Q14790 479 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 BRD3Q15059 726 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 COBLL1Q53SF7 1204 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 TREML2Q5T2D2 321 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 TAF4BQ92750 862 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 GANQ9H2C0 597 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 FAM204AQ9H8W3 233 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 JRKLQ9Y4A0 524 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 DHX15O43143 795 aaKnown RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 EVI5O60447 810 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 EPM2AIP1Q7L775 607 aaPredicted RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 CLMNQ96JQ2 1002 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 PGK2P07205 417 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 USP14P54578 494 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 SLC18A3Q16572 532 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 POMGNT1Q8WZA1 660 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 RIT2Q99578 217 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 A1CFQ9NQ94 594 aaKnown RBP15.11■□□□□ 0.01
TRIM4-201ENST00000349062 KMT5AQ9NQR1 393 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 ANKFY1Q9P2R3 1169 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 ZMYM2Q9UBW7 1377 aa15.11■□□□□ 0.01
TRIM4-201ENST00000349062 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 MYBL2P10244 700 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 C2CD6Q53TS8 623 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 BEND6Q5SZJ8 279 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 TTC19Q6DKK2 380 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 DAAM2Q86T65 1068 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 TRIM31Q9BZY9 425 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 DNAH12Q6ZR08 3092 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 LRRIQ4A6NIV6 560 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 WDR64B1ANS9 1081 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 ANKRD63C9JTQ0 380 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 MAPK7Q13164 816 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 VPS36Q86VN1 386 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 INTS2Q9H0H0 1204 aaKnown RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 OSGEPQ9NPF4 335 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 IBSPP21815 317 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 TTC31Q49AM3 519 aaPredicted RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 PCNX4Q63HM2 1172 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 MICALL1Q8N3F8 863 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 SLC20A1Q8WUM9 679 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 ZBTB10Q96DT7 871 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 KRT12Q99456 494 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 OLFML3Q9NRN5 406 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 RBM12Q9NTZ6 932 aaKnown RBP15.1■□□□□ 0.01
TRIM4-201ENST00000349062 TAS2R14Q9NYV8 317 aa15.1■□□□□ 0.01
TRIM4-201ENST00000349062 FRMPD4Q14CM0 1322 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 FOXN3O00409 490 aaPredicted RBP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 KRT5P13647 590 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 TNFAIP3P21580 790 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 CCND2P30279 289 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 COPB2P35606 906 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 CKAP4Q07065 602 aaKnown RBP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 PPP3CAQ08209 521 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 SULF1Q8IWU6 871 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 CENPHQ9H3R5 247 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 PLCB1Q9NQ66 1216 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 HSPBP1Q9NZL4 362 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 MYH11P35749 1972 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 ZNF280AP59817 542 aaPredicted RBP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 PSMC5P62195 406 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 DMP1Q13316 513 aaPredicted RBP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 ANO5Q75V66 913 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 SND1Q7KZF4 910 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIM4-201ENST00000349062 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 TCHPQ9BT92 498 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 TLR10Q9BXR5 811 aa15.09■□□□□ 0.01
TRIM4-201ENST00000349062 UBIAD1Q9Y5Z9 338 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms