RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GJB7Q6PEY0 223 aa22.2■■□□□ 1.14
CHRNA3-202ENST00000348639 INTS8Q75QN2 995 aaKnown RBP22.2■■□□□ 1.14
CHRNA3-202ENST00000348639 ATP6V0A1Q93050 837 aa22.2■■□□□ 1.14
CHRNA3-202ENST00000348639 RHOXF2Q9BQY4 288 aa22.2■■□□□ 1.14
CHRNA3-202ENST00000348639 DAAM1Q9Y4D1 1078 aa22.2■■□□□ 1.14
CHRNA3-202ENST00000348639 ZNF185O15231 689 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 SLC16A4O15374 487 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 TRIM49P0CI25 452 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 TRIM49CP0CI26 452 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 KRT13P13646 458 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 GNPTABQ3T906 1256 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 CHST13Q8NET6 341 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 SYT17Q9BSW7 474 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 JPH1Q9HDC5 661 aaPredicted RBP22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 GABBR1Q9UBS5 961 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 BTNL10A8MVZ5 291 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 SPATA31C2B4DYI2 1134 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 BUB1O43683 1085 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 PSAPP07602 524 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 FERP16591 822 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 TCP1P17987 556 aaKnown RBP22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 STAT1P42224 750 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 MYL7Q01449 175 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 SP4Q02446 784 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 C9orf131Q5VYM1 1079 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 RDH13Q8NBN7 331 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 STK33Q9BYT3 514 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 SLC9A2Q9UBY0 812 aa22.19■■□□□ 1.14
CHRNA3-202ENST00000348639 WDR90Q96KV7 1748 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 TISP43B9A030 160 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 MAPK13O15264 365 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 ZNF862O60290 1169 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 SORBS3O60504 671 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 STBD1O95210 358 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 TBC1D8O95759 1140 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 KLRC1P26715 233 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 NAP1L1P55209 391 aaKnown RBP22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 GADL1Q6ZQY3 521 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 CREG2Q8IUH2 290 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 CAGE1Q8TC20 777 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 CBWD1Q9BRT8 395 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 INTS2Q9H0H0 1204 aaKnown RBP22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 PCIF1Q9H4Z3 704 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 ELP3Q9H9T3 547 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 HYOU1Q9Y4L1 999 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 KIAA1217Q5T5P2 1943 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 PDE2AO00408 941 aaPredicted RBP22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 IREB2P48200 963 aaKnown RBP22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 SMTNP53814 917 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 XXYLT1Q8NBI6 393 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 DNERQ8NFT8 737 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 KIFAP3Q92845 792 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 HVCN1Q96D96 273 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 OTUD5Q96G74 571 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 OSBPL9Q96SU4 736 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 HSPBP1Q9NZL4 362 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 TSKSQ9UJT2 592 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 NAGPAQ9UK23 515 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 DNAJC12Q9UKB3 198 aa22.18■■□□□ 1.14
CHRNA3-202ENST00000348639 SOX5P35711 763 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 SWSAP1Q6NVH7 229 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 ZNF572Q7Z3I7 529 aaPredicted RBP22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 VPS36Q86VN1 386 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 ANKRD35Q8N283 1001 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 TMEM161BQ8NDZ6 487 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 CEP170P1Q96L14 293 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 TLR10Q9BXR5 811 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 PACSIN1Q9BY11 444 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 C17orf75Q9HAS0 396 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 APEX2Q9UBZ4 518 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 NENFQ9UMX5 172 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 EXOC7Q9UPT5 735 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 PCDHGC5Q9Y5F6 944 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 MYH10P35580 1976 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 ATP8B3O60423 1300 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 LOC285556D6RIA3 1793 aa22.17■■□□□ 1.14
CHRNA3-202ENST00000348639 F8VZ95 297 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 SOCS7O14512 581 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 IRF6O14896 467 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 ERLIN1O75477 346 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 NPTX2P47972 431 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 VAMP7P51809 220 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 ACTR2P61160 394 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 DMP1Q13316 513 aaPredicted RBP22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 LONRF2Q1L5Z9 754 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 ABHD15Q6UXT9 468 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 LBX2Q6XYB7 198 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 FMNL3Q8IVF7 1028 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 NTPCRQ9BSD7 190 aaKnown RBP22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 P4HA2O15460 535 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 N4BP1O75113 896 aaKnown RBP22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 GFPT2O94808 682 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 RFX1P22670 979 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 ITIH3Q06033 890 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 TTLL12Q14166 644 aaPredicted RBP22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 WDR93Q6P2C0 686 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 ALKBH5Q6P6C2 394 aaKnown RBP22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 LMO3Q8TAP4 145 aa22.16■■□□□ 1.14
CHRNA3-202ENST00000348639 COG1Q8WTW3 980 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms