RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PLTPP55058 493 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 DNAJC12Q9UKB3 198 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FRMD4BQ9Y2L6 1034 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PCDHA1Q9Y5I3 950 aa10.94□□□□□ -0.66
TRAPPC6B-202ENST00000347691 DCDC2CA8MYV0 355 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L10C9JJH3 530 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FAM13AO94988 1023 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 BCRP11274 1271 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 HOXD13P35453 343 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FMO5P49326 533 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 ZNF131P52739 623 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SLC8A3P57103 927 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 DRAP1Q14919 205 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PTPROQ16827 1216 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 CYFIP1Q7L576 1253 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 TRPM8Q7Z2W7 1104 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RPS6KC1Q96S38 1066 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PPP1R9AQ9ULJ8 1098 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SUFUQ9UMX1 484 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 MFSD5Q6N075 450 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 GJA10Q969M2 543 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 BORCS6Q96GS4 357 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 IFT74Q96LB3 600 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 AZI2Q9H6S1 392 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 NOD2Q9HC29 1040 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 APEX2Q9UBZ4 518 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SRP68Q9UHB9 627 aaKnown RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FRMPD4Q14CM0 1322 aa10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 AHDC1Q5TGY3 1603 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC6B-202ENST00000347691 ATP2C2O75185 946 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 VIMP08670 466 aaKnown RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RARGP13631 454 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 VCAM1P19320 739 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 GBP2P32456 591 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RFC4P35249 363 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 STAT3P40763 770 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 LMNB2Q03252 620 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 CETN1Q12798 172 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 KIF22Q14807 665 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PRR16Q569H4 304 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 MDM1Q8TC05 714 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SYT11Q9BT88 431 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 WNT8AQ9H1J5 351 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 OSGEPQ9NPF4 335 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 BATF3Q9NR55 127 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 AFF2P51816 1311 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PASKQ96RG2 1323 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 TLDC2A0PJX2 215 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 RASGRF2O14827 1237 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SPATA31C1P0DKV0 1188 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 MUTP22033 750 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 EIF6P56537 245 aaKnown RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 MYBPC2Q14324 1141 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 QRICH1Q2TAL8 776 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 DCAF12L1Q5VU92 463 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 TTBK2Q6IQ55 1244 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 EPB41L4BQ9H329 900 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SNX24Q9Y343 169 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 DAGLAQ9Y4D2 1042 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 STRCQ7RTU9 1775 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 GNPATO15228 680 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 SUN1O94901 812 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 ABCB4P21439 1286 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 CTNNA2P26232 953 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 CASP4P49662 377 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 NFIXQ14938 502 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 USP17L6PQ6QN14 398 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 ZDHHC24Q6UX98 284 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FAM228AQ86W67 206 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 LRRC34Q8IZ02 419 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 FBXO25Q8TCJ0 367 aa10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 INTS2Q9H0H0 1204 aaKnown RBP10.92□□□□□ -0.66
TRAPPC6B-202ENST00000347691 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms