RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 ORC4O43929 436 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 FKBP3Q00688 224 aaKnown RBP16.04■□□□□ 0.16
CUL3-202ENST00000344951 ANKRD40Q6AI12 368 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
CUL3-202ENST00000344951 CYP4F11Q9HBI6 524 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 ZSWIM5Q9P217 1185 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.04■□□□□ 0.16
CUL3-202ENST00000344951 LZTS1Q9Y250 596 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 TMCC1O94876 653 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 NUMBP49757 651 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 SLC13A1Q9BZW2 595 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 PALMO75781 387 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 CARSP49589 748 aaKnown RBP16.04■□□□□ 0.16
CUL3-202ENST00000344951 NUGGCQ68CJ6 796 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 CRLF3Q8IUI8 442 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
CUL3-202ENST00000344951 CA4P22748 312 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 PPP3CCP48454 512 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 EMBQ6PCB8 327 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 SP110Q9HB58 689 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 STX18Q9P2W9 335 aaKnown RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 MAN1A2O60476 641 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 HMBSP08397 361 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 MMEP08473 750 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 USP14P54578 494 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 USP17L3A6NCW0 530 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 USP17L4A6NCW7 530 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 PWP1Q13610 501 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 FAM47EQ6ZV65 393 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 USP17L1Q7RTZ2 530 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 ANGPTL2Q9UKU9 493 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 TRAF3IP3Q9Y228 551 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 AGRPO00253 132 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 DIAPH2O60879 1101 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 MAGEB10Q96LZ2 347 aaPredicted RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 F8W8V4 182 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 DMC1Q14565 340 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 E2F8A0AVK6 867 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 SKIP12755 728 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 CUL1Q13616 776 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
CUL3-202ENST00000344951 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
CUL3-202ENST00000344951 BMP3P12645 472 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 C6orf118Q5T5N4 469 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 PATL1Q86TB9 770 aaKnown RBP16.02■□□□□ 0.16
CUL3-202ENST00000344951 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 SUPT3HO75486 399 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 FGGP02679 453 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 CPB1P15086 417 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 IREB2P48200 963 aaKnown RBP16.02■□□□□ 0.16
CUL3-202ENST00000344951 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
CUL3-202ENST00000344951 ACTN3Q08043 901 aaPredicted RBP16.02■□□□□ 0.16
CUL3-202ENST00000344951 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
CUL3-202ENST00000344951 MFSD4BQ5TF39 518 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 OSBPL10Q9BXB5 764 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 MORC2Q9Y6X9 1032 aaPredicted RBP16.02■□□□□ 0.15
CUL3-202ENST00000344951 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.15
CUL3-202ENST00000344951 URGCPQ8TCY9 931 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 RUBCNLQ9H714 662 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 NOP53Q9NZM5 478 aaKnown RBP16.02■□□□□ 0.15
CUL3-202ENST00000344951 SNX5Q9Y5X3 404 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 IQANK1A0A1B0GTG1 560 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 K7ERI5 159 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 IMPDH2P12268 514 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 LCP1P13796 627 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 PALMDQ9NP74 551 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 DCTN4Q9UJW0 460 aa16.02■□□□□ 0.15
CUL3-202ENST00000344951 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
CUL3-202ENST00000344951 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 OCA2Q04671 838 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 TTC23LQ6PF05 361 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 RHPN2Q8IUC4 686 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 ADAM33Q9BZ11 813 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
CUL3-202ENST00000344951 GEMIN8Q9NWZ8 242 aaKnown RBP16.01■□□□□ 0.15
CUL3-202ENST00000344951 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 STK17AQ9UEE5 414 aa16.01■□□□□ 0.15
CUL3-202ENST00000344951 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.01■□□□□ 0.15
CUL3-202ENST00000344951 ADAMTS1Q9UHI8 967 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms