RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 EDEM3Q9BZQ6 932 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 ADAM22Q9P0K1 906 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 CLDN3O15551 220 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 FMO5P49326 533 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 CENPPQ6IPU0 288 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 CROCCP2Q86T23 111 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 MCPH1Q8NEM0 835 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 GRK7Q8WTQ7 553 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 TRIM7Q9C029 511 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 CCDC188H7C350 402 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 KRT1P04264 644 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 P4HA1P13674 534 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 RWDD2BP57060 319 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 STXBP2Q15833 593 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 E2F4Q16254 413 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 IL17AQ16552 155 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 NEK9Q8TD19 979 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 ZDHHC15Q96MV8 337 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 ATP6V0A4Q9HBG4 840 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 PCDHA10Q9Y5I2 948 aa14.07□□□□□ -0.16
TCF3-202ENST00000344749 ACOT2P49753 483 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 RHBDL3P58872 404 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 YWHAEP62258 255 aaKnown RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 ALCAMQ13740 583 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.06□□□□□ -0.16
TCF3-202ENST00000344749 FAM149B1Q96BN6 582 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 PNMA5Q96PV4 448 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 HESX1Q9UBX0 185 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 CNOT7Q9UIV1 285 aaKnown RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 FMN2Q9NZ56 1722 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 H7C0C1 242 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 POLRMTO00411 1230 aaKnown RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 ARP10275 920 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 DPEP1P16444 411 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ATP5OP48047 213 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 EDRF1Q3B7T1 1238 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ALS2CLQ60I27 953 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.16
TCF3-202ENST00000344749 RNF25Q96BH1 459 aaPredicted RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 DUSP9Q99956 384 aaKnown RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 GPRC5CQ9NQ84 441 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ARHGAP20Q9P2F6 1191 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 LTN1O94822 1766 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 TBX3O15119 743 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 SART1O43290 800 aaKnown RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 CA8P35219 290 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ZNF131P52739 623 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 IFRD2Q12894 506 aaPredicted RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 EPC2Q52LR7 807 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 KRT39Q6A163 491 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 RINT1Q6NUQ1 792 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 APBB1IPQ7Z5R6 666 aaPredicted RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 NUP85Q9BW27 656 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 PACSIN1Q9BY11 444 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 FAM49AQ9H0Q0 323 aaPredicted RBP14.06□□□□□ -0.16
TCF3-202ENST00000344749 ANAPC5Q9UJX4 755 aa14.06□□□□□ -0.16
TCF3-202ENST00000344749 ARL1P40616 181 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 EZH2Q15910 746 aaKnown RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 POLR3FQ9H1D9 316 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 HERVK_113P62684 666 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 RPS6P62753 249 aaKnown RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 FUT2Q10981 343 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 HP1BP3Q5SSJ5 553 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 APOBEC3HQ6NTF7 200 aaKnown RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 SH3RF1Q7Z6J0 888 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 ZNF564Q8TBZ8 553 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 SCFD1Q8WVM8 642 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 MLXIPLQ9NP71 852 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 HSPBP1Q9NZL4 362 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 C6orf163Q5TEZ5 329 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 CERS5Q8N5B7 392 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 SYT2Q8N9I0 419 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 RFFLQ8WZ73 363 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 ATG4CQ96DT6 458 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 DNAJC7Q99615 494 aa14.05□□□□□ -0.16
TCF3-202ENST00000344749 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.05□□□□□ -0.169e-7■■□□□ 14
TCF3-202ENST00000344749 TTC7AQ9ULT0 858 aaPredicted RBP14.05□□□□□ -0.16
TCF3-202ENST00000344749 ATMINO43313 823 aaPredicted RBP14.04□□□□□ -0.16
TCF3-202ENST00000344749 NR3C2P08235 984 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 CARSP49589 748 aaKnown RBP14.04□□□□□ -0.16
TCF3-202ENST00000344749 BLOC1S4Q9NUP1 217 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 COPB2P35606 906 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 TBX2Q13207 712 aaPredicted RBP14.04□□□□□ -0.16
TCF3-202ENST00000344749 CDO1Q16878 200 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 RNPC3Q96LT9 517 aaKnown RBP14.04□□□□□ -0.16
TCF3-202ENST00000344749 TAAR1Q96RJ0 339 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 ZWILCHQ9H900 591 aa14.04□□□□□ -0.16
TCF3-202ENST00000344749 MRPL47Q9HD33 250 aaKnown RBP14.04□□□□□ -0.16
TCF3-202ENST00000344749 HOXC10Q9NYD6 342 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms