RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 NEUROG2Q9H2A3 272 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 DISC1Q9NRI5 854 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 NMRK1Q9NWW6 199 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 CEP72Q9P209 647 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 PRKAG3Q9UGI9 489 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 ATP8A1Q9Y2Q0 1164 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 ADAMTS7Q9UKP4 1686 aa8.77□□□□□ -1.01
ATG4A-201ENST00000343524 COL18A1P39060 1754 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 B4E1Z4 1266 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TRAFD1O14545 582 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 COBLO75128 1261 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 VIL1P09327 827 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SCNN1BP51168 640 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 GFPT1Q06210 699 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 LSAMPQ13449 338 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 WTAPQ15007 396 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ALX1Q15699 326 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SLC18A3Q16572 532 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TMEM259Q4ZIN3 620 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 C1orf141Q5JVX7 400 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SFMBT2Q5VUG0 894 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 FOXR2Q6PJQ5 311 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TSHZ1Q6ZSZ6 1077 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ZC3H18Q86VM9 953 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ST13P4Q8IZP2 240 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 FITM2Q8N6M3 262 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SMYD1Q8NB12 490 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 RSPH1Q8WYR4 309 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ANKS1AQ92625 1134 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 CATSPER2Q96P56 530 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TAOK3Q9H2K8 898 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 AZI2Q9H6S1 392 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 PREBQ9HCU5 417 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 NKX1-2Q9UD57 310 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TTC7AQ9ULT0 858 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 PITPNM2Q9BZ72 1349 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 MYH1P12882 1939 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TCP11X1B4DZS4 312 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 BTBD19C9JJ37 291 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 BIRC5O15392 142 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 MAP3K7O43318 606 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ATP9AO75110 1047 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 GJA8P48165 433 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 KLK7P49862 253 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 POLGP54098 1239 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 DRG2P55039 364 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 MCL1Q07820 350 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 PTGDRQ13258 359 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 CNPY1Q3B7I2 92 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 C9orf131Q5VYM1 1079 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 CNNM4Q6P4Q7 775 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ARHGEF18Q6ZSZ5 1173 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 CCDC80Q76M96 950 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 LONP2Q86WA8 852 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ZBTB8BQ8NAP8 495 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 FAM13CQ8NE31 585 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ZDHHC16Q969W1 377 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 LENG1Q96BZ8 264 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 TSPAN18Q96SJ8 248 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 DUSP9Q99956 384 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SLX1AQ9BQ83 275 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 UBA5Q9GZZ9 404 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 RANBP17Q9H2T7 1088 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 MMRN2Q9H8L6 949 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 NLRC4Q9NPP4 1024 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 EMILIN3Q9NT22 766 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 FGFR1OP2Q9NVK5 253 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 ATP6V0A2Q9Y487 856 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 BZW2Q9Y6E2 419 aaKnown RBP8.76□□□□□ -1.01
ATG4A-201ENST00000343524 USH1CQ9Y6N9 552 aa8.76□□□□□ -1.01
ATG4A-201ENST00000343524 PKD1L3Q7Z443 1732 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 MYH10P35580 1976 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 PASKQ96RG2 1323 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 KIF13BQ9NQT8 1826 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 SMIM31A0A1B0GVY4 71 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 EYA2O00167 538 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 RASGRF2O14827 1237 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 MAPK13O15264 365 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 AFPP02771 609 aaKnown RBP8.75□□□□□ -1.01
ATG4A-201ENST00000343524 OATP04181 439 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 MARK3P27448 753 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 GUCY1A2P33402 732 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 IFNAR2P48551 515 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 YARSP54577 528 aaKnown RBP8.75□□□□□ -1.01
ATG4A-201ENST00000343524 KCNQ4P56696 695 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 RNASELQ05823 741 aaKnown RBP8.75□□□□□ -1.01
ATG4A-201ENST00000343524 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
ATG4A-201ENST00000343524 STRN3Q13033 797 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 MTFR1Q15390 333 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 TRADDQ15628 312 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 KBTBD12Q3ZCT8 623 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 TNFAIP8L3Q5GJ75 292 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
ATG4A-201ENST00000343524 ZNF530Q6P9A1 599 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-201ENST00000343524 PPP1R21Q6ZMI0 780 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms