RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 EPB41P11171 864 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 STX2P32856 288 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 STK4Q13043 487 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 COG2Q14746 738 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 PSMD6Q15008 389 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 MCTP2Q6DN12 878 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 ANKRD13AQ8IZ07 590 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 PPM1KQ8N3J5 372 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 LMBR1Q8WVP7 490 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 AMACRQ9UHK6 382 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 CETN2P41208 172 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 ANKRD40Q6AI12 368 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 ERMNQ8TAM6 284 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 LIMA1Q9UHB6 759 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 PEX10O60683 326 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 SPATA4Q8NEY3 305 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 FAM118BQ9BPY3 351 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 IQCGQ9H095 443 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 INTS9Q9NV88 658 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 AMFRQ9UKV5 643 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 DLATP10515 647 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 ACTN1P12814 892 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 EPHB4P54760 987 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 MMS22LQ6ZRQ5 1243 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 RBM12Q9NTZ6 932 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 ABCB11O95342 1321 aa11.31□□□□□ -0.6
CAPRIN1-201ENST00000341394 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZBED6P86452 979 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 KIF22Q14807 665 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 NR1I3Q14994 352 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 OSBPL9Q96SU4 736 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PTPRFP10586 1907 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 E9PMD0 336 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 FGGP02679 453 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PDHA1P08559 390 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 IRAK1P51617 712 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 GRM1Q13255 1194 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 SNCBQ16143 134 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF365Q70YC5 407 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 MMTAG2Q9BU76 263 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 RNF146Q9NTX7 359 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 RWDD2AQ9UIY3 292 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 GINS2Q9Y248 185 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 BAG2O95816 211 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 EIF2AK2P19525 551 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 STAT1P42224 750 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 DPYDQ12882 1025 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 SYCP2LQ5T4T6 812 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 PDXDC2PQ6P474 469 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 FRMD4BQ9Y2L6 1034 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 USH1CQ9Y6N9 552 aa11.3□□□□□ -0.6
CAPRIN1-201ENST00000341394 DAPK3O43293 454 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ICAM1P05362 532 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ATF7P17544 494 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 TUBB4BP68371 445 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 SETDB1Q15047 1291 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZC3H15Q8WU90 426 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 HAS1Q92839 578 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 GUCY2CP25092 1073 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 STAT3P40763 770 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 USP11P51784 963 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 EXOC3L4Q17RC7 722 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms