RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SREBF1P36956 1147 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 POLGP54098 1239 aaPredicted RBP18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 PTPN14Q15678 1187 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 PLA2G4DQ86XP0 818 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 TMEM87AQ8NBN3 555 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 DNAJB4Q9UDY4 337 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 CA14Q9ULX7 337 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 DOCK6Q96HP0 2047 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
NECTIN1-202ENST00000340882 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 ADAMTS3O15072 1205 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 DCNP07585 359 aaKnown RBP18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 GALTP07902 379 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 DARSP14868 501 aaKnown RBP18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 GPC3P51654 580 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 CLCN4P51793 760 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 BMS1Q14692 1282 aaKnown RBP18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 LETM2Q2VYF4 491 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 KLHL5Q96PQ7 755 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 MRPL9Q9BYD2 267 aaKnown RBP18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 DLGAP2Q9P1A6 1054 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 WNT16Q9UBV4 365 aa18.56■□□□□ 0.56
NECTIN1-202ENST00000340882 CNTNAP5Q8WYK1 1306 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 MIA3Q5JRA6 1907 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 IPO5O00410 1097 aaKnown RBP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 CNPP09543 421 aaKnown RBP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 SP9P0CG40 484 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 ZNF76P36508 570 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 SLC11A1P49279 550 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 CLK2P49760 499 aaKnown RBP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 NAPAP54920 295 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 NIPA1Q7RTP0 329 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 MAP4K1Q92918 833 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 HINFPQ9BQA5 517 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 TBC1D17Q9HA65 648 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 IGSF9Q9P2J2 1179 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 GABBR1Q9UBS5 961 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 ACACBO00763 2458 aa18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 MTCL1Q9Y4B5 1905 aaKnown RBP18.55■□□□□ 0.56
NECTIN1-202ENST00000340882 POTEMA6NI47 508 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 MAGEB2O15479 319 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 ZNF862O60290 1169 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 LILRB3O75022 631 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 FOSP01100 380 aaPredicted RBP18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 MYBP10242 640 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 PHKA2P46019 1235 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 ADCY7P51828 1080 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 DRP2Q13474 957 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 GIT2Q14161 759 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 POTEGQ6S5H5 508 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 ZNF280BQ86YH2 543 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 SLC44A3Q8N4M1 653 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 ST13P5Q8NFI4 369 aaPredicted RBP18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 CRYGNQ8WXF5 182 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 MYADMQ96S97 322 aa18.54■□□□□ 0.56
NECTIN1-202ENST00000340882 ZFHX4Q86UP3 3567 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 SMCO2A6NFE2 343 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 SPDYE4A6NLX3 237 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 SGSM2O43147 1006 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 CALM1P0DP23 149 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 CALM2P0DP24 149 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 CALM3P0DP25 149 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 GLULP15104 373 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 KLRC2P26717 231 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 FUT2Q10981 343 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 RSPO4Q2I0M5 234 aaPredicted RBP18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 MICU3Q86XE3 530 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 TMTC2Q8N394 836 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 SUMF1Q8NBK3 374 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 RUBCNQ92622 972 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 GBP3Q9H0R5 595 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 INPP5FQ9Y2H2 1132 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
NECTIN1-202ENST00000340882 PATJQ8NI35 1801 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 LRRN2O75325 713 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 OFD1O75665 1012 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 MCM5P33992 734 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 LIFRP42702 1097 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 AFF1P51825 1210 aaKnown RBP18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 NOMO2Q5JPE7 1267 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 JAKMIP3Q5VZ66 844 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 C15orf39Q6ZRI6 1047 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 MAML2Q8IZL2 1156 aaPredicted RBP18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 GPR152Q8TDT2 470 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 RUFY2Q8WXA3 655 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms