RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 LPPQ93052 612 aa15.57■□□□□ 0.08
UPK3BL1-201ENST00000340457 SNX27Q96L92 541 aa15.57■□□□□ 0.08
UPK3BL1-201ENST00000340457 SH2D3AQ9BRG2 576 aa15.57■□□□□ 0.08
UPK3BL1-201ENST00000340457 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
UPK3BL1-201ENST00000340457 DMDP11532 3685 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 ESYT2A0FGR8 921 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 MSH4O15457 936 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 EDIL3O43854 480 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 ZC3H11AO75152 810 aaKnown RBP eCLIP15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 EPCAMP16422 314 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 ALDH7A1P49419 539 aaKnown RBP15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 TBC1D8BQ0IIM8 1120 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 MTMR3Q13615 1198 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 Q6ZUG5 572 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 TMEM105Q8N8V8 129 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 BRF1Q92994 677 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 UNC45AQ9H3U1 944 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 LIMD1Q9UGP4 676 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 SORCS3Q9UPU3 1222 aa15.56■□□□□ 0.08
UPK3BL1-201ENST00000340457 PLXNA3P51805 1871 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 MEIS3P2A8K0S8 358 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 GAS7O60861 476 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 EOMESO95936 686 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 CIITAP33076 1130 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 ITIH3Q06033 890 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 TSGA10IPQ3SY00 556 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 MTERF2Q49AM1 385 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 TMEM87AQ8NBN3 555 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 BCL7CQ8WUZ0 217 aaPredicted RBP15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 NECTIN4Q96NY8 510 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 INPP5FQ9Y2H2 1132 aa15.55■□□□□ 0.08
UPK3BL1-201ENST00000340457 CCDC196A0A1B0GTZ2 297 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 PRPF3O43395 683 aaKnown RBP15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 GALR2O43603 387 aaPredicted RBP15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 GNA11P29992 359 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 MTHFRP42898 656 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 TMC5Q6UXY8 1006 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 UBALD2Q8IYN6 164 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 GBP3Q9H0R5 595 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 ZBP1Q9H171 429 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 DACT1Q9NYF0 836 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 VPS54Q9P1Q0 977 aa15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 SEPT9Q9UHD8 586 aaPredicted RBP15.54■□□□□ 0.08
UPK3BL1-201ENST00000340457 A0A087WZ62 844 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 PHKA2P46019 1235 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 RCAN1P53805 252 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 KRT32Q14532 448 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 TARBP2Q15633 366 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 BMP2KLQ5H9B9 411 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 LRCH2Q5VUJ6 765 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 MCTP2Q6DN12 878 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 ASCL5Q7RTU5 278 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 TDRD5Q8NAT2 981 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 SLC5A5Q92911 643 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 FDXACB1Q9BRP7 624 aaPredicted RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 TEKT3Q9BXF9 490 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 SLC26A6Q9BXS9 759 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 GCOM2Q9BZD3 368 aaPredicted RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 DBR1Q9UK59 544 aaKnown RBP15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 GVINP1Q7Z2Y8 2422 aa15.53■□□□□ 0.08
UPK3BL1-201ENST00000340457 B4GALT3O60512 393 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 BMS1Q14692 1282 aaKnown RBP15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 ATAT1Q5SQI0 421 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 KSR1Q8IVT5 923 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 SLC22A17Q8WUG5 538 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 RIT2Q99578 217 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 VN1R3Q9BXE9 311 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 IRF2BPLQ9H1B7 796 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 MFSD1Q9H3U5 465 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 NCOA5Q9HCD5 579 aaKnown RBP15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 TBC1D13Q9NVG8 400 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 DNAJB4Q9UDY4 337 aa15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
UPK3BL1-201ENST00000340457 STBD1O95210 358 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 GALTP07902 379 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 CTSAP10619 480 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 SFNP31947 248 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 JAK3P52333 1124 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 CCT2P78371 535 aaKnown RBP15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 NOMO2Q5JPE7 1267 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 KIAA1841Q6NSI8 718 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 MIER3Q7Z3K6 550 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 DDX53Q86TM3 631 aaKnown RBP15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 ZNF710Q8N1W2 664 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
UPK3BL1-201ENST00000340457 CEP89Q96ST8 783 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms