RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIN54-201ENST00000340417 ADCYAP1R1P41586 468 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 METTL7BQ6UX53 244 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 ASIC3Q9UHC3 531 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.19
LIN54-201ENST00000340417 MYO1FO00160 1098 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 BEX3Q00994 111 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 PDIA5Q14554 519 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 GRIK5Q16478 980 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 PGBD3Q8N328 593 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 TTC39CQ8N584 583 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 PAIP2Q9BPZ3 127 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 CNTNAP5Q8WYK1 1306 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 ESPNB1AK53 854 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 RIOK3O14730 519 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 CD4P01730 458 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 SARNPP82979 210 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 RPS6KA1Q15418 735 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 RWDD4Q6NW29 188 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 CEP128Q6ZU80 1094 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 BTBD19C9JJ37 291 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 EEF1GP26641 437 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 GCLMP48507 274 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 AP3M2P53677 418 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 PRAMEF19Q5SWL8 479 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 TNIP3Q96KP6 325 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 SETD4Q9NVD3 440 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 SPDYE5A6NIY4 337 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 H0YHG0 523 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 HOXC6P09630 235 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 ALDH1A3P47895 512 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 EPHB1P54762 984 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 ARHGAP15Q53QZ3 475 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 GJC2Q5T442 439 aaPredicted RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 PCNX4Q63HM2 1172 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 LEKR1Q6ZMV7 388 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 RFX6Q8HWS3 928 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 CCT6BQ92526 530 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 PHF20Q9BVI0 1012 aa13.83□□□□□ -0.2
LIN54-201ENST00000340417 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.2
LIN54-201ENST00000340417 CUL4AQ13619 759 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 PKP1Q13835 747 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 PLCB4Q15147 1175 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 KIZQ2M2Z5 673 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 ELNP15502 786 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 ITIH3Q06033 890 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 GEN1Q17RS7 908 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 AGAP1Q9UPQ3 857 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 BZW2Q9Y6E2 419 aaKnown RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 HSF2BPO75031 334 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 ZC3H11AO75152 810 aaKnown RBP eCLIP13.82□□□□□ -0.2
LIN54-201ENST00000340417 URODP06132 367 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 SLC26A2P50443 739 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 IFT81Q8WYA0 676 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 WDR18Q9BV38 432 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 CYBBP04839 570 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 MYBP10242 640 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 TGFB3P10600 412 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 KLRC1P26715 233 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 PSEN2P49810 448 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 KAZNQ674X7 775 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 CCNYQ8ND76 341 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 GFPT2O94808 682 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 PGK1P00558 417 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 PPP2R5CQ13362 524 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 CLUL1Q15846 466 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 LRRC31Q6UY01 552 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 TMC7Q7Z402 723 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 PDCD2LQ9BRP1 358 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
LIN54-201ENST00000340417 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
LIN54-201ENST00000340417 H7C0C1 242 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 NEMP1O14524 444 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 SLU7O95391 586 aaKnown RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 IFNB1P01574 187 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 ATP5OP48047 213 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 ANTXR2P58335 489 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms