RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SFNP31947 248 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 GPC3P51654 580 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 JAK3P52333 1124 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 PTPN5P54829 565 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 TBC1D8BQ0IIM8 1120 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 PTPN21Q16825 1174 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 CLLU1OSQ5K130 101 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 IER5LQ5T953 404 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 SYCE2Q6PIF2 218 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 PRSS33Q8NF86 280 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 NLRP7Q8WX94 980 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 RIT2Q99578 217 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 APOL5Q9BWW9 433 aa17.63■□□□□ 0.41
LINC01116-202ENST00000339037 A0A0U1RQF3 1178 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 UGCGQ16739 394 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 LRCH2Q5VUJ6 765 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 ZBTB33Q86T24 672 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
LINC01116-202ENST00000339037 MRPL9Q9BYD2 267 aaKnown RBP17.62■□□□□ 0.41
LINC01116-202ENST00000339037 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 VPS54Q9P1Q0 977 aa17.62■□□□□ 0.41
LINC01116-202ENST00000339037 EOMESO95936 686 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 SP100P23497 879 aaPredicted RBP17.61■□□□□ 0.41
LINC01116-202ENST00000339037 USP11P51784 963 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 SMC1AQ14683 1233 aaKnown RBP17.61■□□□□ 0.41
LINC01116-202ENST00000339037 NTRK3Q16288 839 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 TPRNQ4KMQ1 711 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 ZNF598Q86UK7 904 aaKnown RBP17.61■□□□□ 0.41
LINC01116-202ENST00000339037 FBXL16Q8N461 479 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 HELQQ8TDG4 1101 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 CASP10Q92851 521 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 SLC5A5Q92911 643 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 KCNB2Q92953 911 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 TEKT3Q9BXF9 490 aa17.61■□□□□ 0.41
LINC01116-202ENST00000339037 DMDP11532 3685 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
LINC01116-202ENST00000339037 IFNAR1P17181 557 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 FGFR4P22455 802 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 RPS6KB1P23443 525 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 HSPA4P34932 840 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
LINC01116-202ENST00000339037 CES5AQ6NT32 575 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 SLC39A11Q8N1S5 342 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 MRPL43Q8N983 215 aaKnown RBP17.6■□□□□ 0.41
LINC01116-202ENST00000339037 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 UNC45AQ9H3U1 944 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 SEPT9Q9UHD8 586 aaPredicted RBP17.6■□□□□ 0.41
LINC01116-202ENST00000339037 NR2E1Q9Y466 385 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 HCFC2Q9Y5Z7 792 aa17.6■□□□□ 0.41
LINC01116-202ENST00000339037 C2orf71A6NGG8 1288 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 EDIL3O43854 480 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 PPP1R37O75864 691 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 CA8P35219 290 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 BCAR1P56945 870 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 NLRP5P59047 1200 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 CDC42EP1Q00587 391 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 DRP2Q13474 957 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 BMS1Q14692 1282 aaKnown RBP17.59■□□□□ 0.41
LINC01116-202ENST00000339037 TARBP2Q15633 366 aaKnown RBP17.59■□□□□ 0.41
LINC01116-202ENST00000339037 RDM1Q8NG50 284 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 GJA10Q969M2 543 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 TMEM169Q96HH4 297 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 NECTIN4Q96NY8 510 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 GCOM2Q9BZD3 368 aaPredicted RBP17.59■□□□□ 0.41
LINC01116-202ENST00000339037 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
LINC01116-202ENST00000339037 SH3GLB2Q9NR46 395 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 CDH22Q9UJ99 828 aa17.59■□□□□ 0.41
LINC01116-202ENST00000339037 SFPQP23246 707 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC01116-202ENST00000339037 DNM2P50570 870 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 VCPP55072 806 aaKnown RBP17.58■□□□□ 0.4
LINC01116-202ENST00000339037 ITIH3Q06033 890 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 TCF15Q12870 199 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 MTERF2Q49AM1 385 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 XKR3Q5GH77 459 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 MIER3Q7Z3K6 550 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 TBCKQ8TEA7 893 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 RSPH1Q8WYR4 309 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 C22orf23Q9BZE7 217 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 ADAM7Q9H2U9 754 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 CHST12Q9NRB3 414 aa17.58■□□□□ 0.4
LINC01116-202ENST00000339037 NT5C1B-RDH14C9J2C7 533 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC01116-202ENST00000339037 PSMD10O75832 226 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 PSMA5P28066 241 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
LINC01116-202ENST00000339037 PHKA2P46019 1235 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
LINC01116-202ENST00000339037 Q4G0T1 1027 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
LINC01116-202ENST00000339037 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 TMEM87AQ8NBN3 555 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 TRAIPQ9BWF2 469 aa17.57■□□□□ 0.4
LINC01116-202ENST00000339037 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
LINC01116-202ENST00000339037 POMKQ9H5K3 350 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms