RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CD302Q8IX05 232 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 LPAR1Q92633 364 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 GMCL1Q96IK5 515 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 TLR10Q9BXR5 811 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 MOV10L1Q9BXT6 1211 aaKnown RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 CPVLQ9H3G5 476 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 C11orf49Q9H6J7 331 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 MMRN2Q9H8L6 949 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 PSTPIP2Q9H939 334 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 ARHGEF10LQ9HCE6 1279 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 GDF3Q9NR23 364 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 NENFQ9UMX5 172 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
RTN3-201ENST00000338850 FRMPD2Q68DX3 1309 aaPredicted RBP11.79□□□□□ -0.52
RTN3-201ENST00000338850 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 CETN3O15182 167 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTN3-201ENST00000338850 ZEB2O60315 1214 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 PLEKP08567 350 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 GAP43P17677 238 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 RPA1P27694 616 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 DSG3P32926 999 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SREBF1P36956 1147 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 NPEPPSP55786 919 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SKOR1P84550 965 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 MFSD14CQ5VZR4 134 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SRLQ86TD4 932 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SPICE1Q8N0Z3 855 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 LRRC47Q8N1G4 583 aaKnown RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 INPP4AQ96PE3 977 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 SPATC1LQ9H0A9 340 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 FAM204AQ9H8W3 233 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 SUGCTQ9HAC7 445 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 OLFML3Q9NRN5 406 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 FAM207AQ9NSI2 230 aaPredicted RBP11.78□□□□□ -0.52
RTN3-201ENST00000338850 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTN3-201ENST00000338850 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 PFASO15067 1338 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 ALPK3Q96L96 1907 aa11.78□□□□□ -0.52
RTN3-201ENST00000338850 A0A0G2JMZ2 1700 aa11.77□□□□□ -0.52
RTN3-201ENST00000338850 RANBP2P49792 3224 aaKnown RBP11.77□□□□□ -0.52
RTN3-201ENST00000338850 GOLGA6BA6NDN3 693 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 AGPSO00116 658 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 CALUO43852 315 aaPredicted RBP11.77□□□□□ -0.53
RTN3-201ENST00000338850 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 MOCS3O95396 460 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 IGHA2P01877 340 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 MYBP10242 640 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 COL6A1P12109 1028 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 PAK2Q13177 524 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 DPY19L2P1Q6NXN4 242 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 C8orf74Q6P047 294 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 IFT20Q8IY31 132 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 SHCBP1Q8NEM2 672 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 FAM76AQ8TAV0 307 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 WHAMMQ8TF30 809 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 ATG4CQ96DT6 458 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 PBKQ96KB5 322 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 RNF39Q9H2S5 420 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 TYW1Q9NV66 732 aaKnown RBP11.77□□□□□ -0.53
RTN3-201ENST00000338850 TMEM59LQ9UK28 342 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 RLFQ13129 1914 aa11.77□□□□□ -0.53
RTN3-201ENST00000338850 A0A1W2PPC1 479 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 FLOT1O75955 427 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 ERCC3P19447 782 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 RFX1P22670 979 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 RPL13P26373 211 aaKnown RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 ADORA2AP29274 412 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 SLC1A4P43007 532 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 TNNT3P45378 269 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms