RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 AP1ARQ63HQ0 302 aa10.96□□□□□ -0.66
HIF1A-202ENST00000337138 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.66
HIF1A-202ENST00000337138 PNMA2Q9UL42 364 aa10.96□□□□□ -0.66
HIF1A-202ENST00000337138 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 CYP11B2P19099 503 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 STAT1P42224 750 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 LRRC14Q15048 493 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 IFI16Q16666 785 aaKnown RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TNFAIP8L3Q5GJ75 292 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 B3GNT9Q6UX72 402 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 CCDC26Q8TAB7 109 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 PAIP2Q9BPZ3 127 aaKnown RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 NT5C3AQ9H0P0 336 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 SAMD15Q9P1V8 674 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 AMFRQ9UKV5 643 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TRAF3IP3Q9Y228 551 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 AKAP3O75969 853 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 VPS72Q15906 364 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 KRT27Q7Z3Y8 459 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 DEFB132Q7Z7B7 95 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 ANKRD42Q8N9B4 389 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 WHAMMQ8TF30 809 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 SLC12A6Q9UHW9 1150 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 SERPINB13Q9UIV8 391 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 NAGPAQ9UK23 515 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 ENO4A6NNW6 628 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TTLL1O95922 423 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 PRKCIP41743 596 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 MESDQ14696 234 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 QPCTQ16769 361 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 GKAP1Q5VSY0 366 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 DCAF12L1Q5VU92 463 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 TBC1D1Q86TI0 1168 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-202ENST00000337138 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 DONSONQ9NYP3 566 aa10.95□□□□□ -0.66
HIF1A-202ENST00000337138 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 SLC26A4O43511 780 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 PAX7P23759 505 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 GALCP54803 685 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ITGB3BPQ13352 177 aaPredicted RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 SNX1Q13596 522 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 COG2Q14746 738 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 PRR5LQ6MZQ0 368 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ERMNQ8TAM6 284 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 MKL1Q969V6 931 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 SPDL1Q96EA4 605 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ANO3Q9BYT9 981 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 KIF1CO43896 1103 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 NR3C1P04150 777 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 PLCG2P16885 1265 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 GLE1Q53GS7 698 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ATP8B4Q8TF62 1192 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ZC3H12CQ9C0D7 883 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 DHX36Q9H2U1 1008 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 VAV3Q9UKW4 847 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 COL4A5P29400 1685 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 A6NNZ2 444 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 EXOC3O60645 756 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 PCK1P35558 622 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 TUBB8Q3ZCM7 444 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 NSMFQ6X4W1 530 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 CCDC13Q8IYE1 715 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 ADAM33Q9BZ11 813 aa10.94□□□□□ -0.66
HIF1A-202ENST00000337138 SPATS2LQ9NUQ6 558 aaKnown RBP10.94□□□□□ -0.66
HIF1A-202ENST00000337138 A0A0G2JMZ2 1700 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 LRRC37A2A6NM11 1700 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 ASTN1O14525 1302 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 ZBTB7AO95365 584 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 HSPA9P38646 679 aaKnown RBP10.93□□□□□ -0.66
HIF1A-202ENST00000337138 NFIAQ12857 509 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 NFIL3Q16649 462 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 ASPRV1Q53RT3 343 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 LMBR1Q8WVP7 490 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 HOOK2Q96ED9 719 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 PLCB1Q9NQ66 1216 aa10.93□□□□□ -0.66
HIF1A-202ENST00000337138 SWAP70Q9UH65 585 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms