RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PEX3P56589 373 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 PSMC5P62195 406 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 KLHL38Q2WGJ6 581 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■□□□□ 9.8
FN1-202ENST00000336916 ACAD11Q709F0 780 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 WNT8AQ9H1J5 351 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 MARK3P27448 753 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 NHEJ1Q9H9Q4 299 aaPredicted RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 STK38LQ9Y2H1 464 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 PPCSQ9HAB8 311 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 GOLGA8SH3BPF8 625 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 ANO4Q32M45 955 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 WDR75Q8IWA0 830 aaKnown RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 LSM7Q9UK45 103 aaKnown RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 AGLP35573 1532 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 CD4P01730 458 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 HNRNPCL2B2RXH8 293 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 HNRNPCL1O60812 293 aaKnown RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 MTA1Q13330 715 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 SPARCL1Q14515 664 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 IMPG1Q17R60 797 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 EFHC2Q5JST6 749 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 COBLO75128 1261 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 CASP2P42575 452 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 ZMYND12Q9H0C1 365 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 SPON1Q9HCB6 807 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 BARHL2Q9NY43 387 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 ADAM22Q9P0K1 906 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 GFPT2O94808 682 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
FN1-202ENST00000336916 MED21Q13503 144 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 OR6B2Q6IFH4 312 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 SP110Q9HB58 689 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 GPC5P78333 572 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 YY1AP1Q9H869 796 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 LRRD1A4D1F6 860 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 RALBP11234 206 aa13.07□□□□□ -0.32
FN1-202ENST00000336916 PIK3R2O00459 728 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 IL18RAPO95256 599 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CYP21A2P08686 494 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 SYDE1Q6ZW31 735 aaPredicted RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 ASAP3Q8TDY4 903 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 PCDHA13Q9Y5I0 950 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 BAG2O95816 211 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CASP14P31944 242 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 EPAS1Q99814 870 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 NEUROG2Q9H2A3 272 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CROCCQ5TZA2 2017 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 PVALEFA0A1B0GWK0 134 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CPT1AP50416 773 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 MED15Q96RN5 788 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 SMARCAD1Q9H4L7 1026 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 C21orf2O43822 256 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 SLC25A27O95847 323 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 MORF4L2Q15014 288 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 NOP9Q86U38 636 aaKnown RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 ZWILCHQ9H900 591 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 NDUFA10O95299 355 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 FBXW4P57775 412 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 BAIAP2L1Q9UHR4 511 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 SEC24BO95487 1268 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 CDK17Q00537 523 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
FN1-202ENST00000336916 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 SENP1Q9P0U3 644 aa13.06□□□□□ -0.32
FN1-202ENST00000336916 ZSCAN26Q16670 478 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 KNOP1Q1ED39 458 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 ANKS3Q6ZW76 656 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms