RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TOB1P50616 345 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 KLHL30Q0D2K2 578 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 EARS2Q5JPH6 523 aaKnown RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 TCP11Q8WWU5 503 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 SH2D3AQ9BRG2 576 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 ATP6V0A4Q9HBG4 840 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TGFB3P10600 412 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 GJC1P36383 396 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 ACTR2P61160 394 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 DDX12PQ92771 950 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 RSRC1Q96IZ7 334 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■■■■ 50.5
HDAC6-201ENST00000334136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 HNRNPDLO14979 420 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TLR2O60603 784 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 CYP2J2P51589 502 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 PEX3P56589 373 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 RNF180Q86T96 592 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 VSIG10LQ86VR7 867 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 UHMK1Q8TAS1 419 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 RAD54LQ92698 747 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 NDUFA10O95299 355 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 LRRC41Q15345 812 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 DGKDQ16760 1214 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 PSPC1Q8WXF1 523 aaKnown RBP12.8□□□□□ -0.36
HDAC6-201ENST00000334136 LRRC45Q96CN5 670 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 VTA1Q9NP79 307 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 MYH1P12882 1939 aa12.8□□□□□ -0.36
HDAC6-201ENST00000334136 KCNK3O14649 394 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 USP49Q70CQ1 688 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 CCDC26Q8TAB7 109 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 RASAL2Q9UJF2 1139 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 K7ERI5 159 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 ADCY3O60266 1144 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 YWHABP31946 246 aaKnown RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 CPT1AP50416 773 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 EHHADHQ08426 723 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 CRHR2Q13324 411 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 KSR1Q8IVT5 923 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 ZNF214Q9UL59 606 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 MFAP3LO75121 409 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 FLT3LGP49771 235 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.364e-6■■■□□ 18.2
HDAC6-201ENST00000334136 NFX1Q12986 1120 aaKnown RBP12.79□□□□□ -0.36
HDAC6-201ENST00000334136 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 E2F5Q15329 346 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
HDAC6-201ENST00000334136 A6NNZ2 444 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 EYA4O95677 639 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 TUBB8Q3ZCM7 444 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 ICE2Q659A1 982 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 RDM1Q8NG50 284 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 GLT1D1Q96MS3 346 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 ANKFY1Q9P2R3 1169 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 MYH7P12883 1935 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
HDAC6-201ENST00000334136 CTNNA2P26232 953 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 RPA1P27694 616 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 VSNL1P62760 191 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 KRT31Q15323 416 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 Q4G0T1 1027 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 PANX2Q96RD6 677 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 MRFAP1Q9Y605 127 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 LY6KQ17RY6 165 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms