RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 LIMA1Q9UHB6 759 aaKnown RBP10.98□□□□□ -0.65
SPTBN1-201ENST00000333896 FBXL5Q9UKA1 691 aa10.98□□□□□ -0.65
SPTBN1-201ENST00000333896 FHOD1Q9Y613 1164 aa10.98□□□□□ -0.65
SPTBN1-201ENST00000333896 URB1O60287 2271 aaKnown RBP10.98□□□□□ -0.65
SPTBN1-201ENST00000333896 CFAP99D6REC4 459 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 AP1G2O75843 785 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 KRT38O76015 456 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 DLATP10515 647 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 BPIFB4P59827 614 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 PTGISQ16647 500 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 CCDC127Q96BQ5 260 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SAC3D1A6NKF1 404 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■■■□□ 16.7
SPTBN1-201ENST00000333896 DYNLT1P63172 113 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 RHOT2Q8IXI1 618 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 KCTD6Q8NC69 237 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 CCNYQ8ND76 341 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TESK2Q96S53 571 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 GOLPH3LQ9H4A5 285 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TUBB1Q9H4B7 451 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 MCM8Q9UJA3 840 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 FAM187AA6NFU0 413 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 IL12RB1P42701 662 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 NR5A1Q13285 461 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 DDX17Q92841 729 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 AK8Q96MA6 479 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 FOXP3Q9BZS1 431 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 LMCD1Q9NZU5 365 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 YEATS2Q9ULM3 1422 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ARIH2O95376 493 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ATP6V1G2O95670 118 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ARMCX4Q5H9R4 360 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 C11orf57Q6ZUT1 292 aaPredicted RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 PDIK1LQ8N165 341 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 RIMS2Q9UQ26 1411 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 PNMA8CA0A1B0GUJ8 204 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ASAP2O43150 1006 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ARFIP2P53365 341 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 PMS2P54278 862 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 SCRN3Q0VDG4 424 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TRMT5Q32P41 509 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 THOC7Q6I9Y2 204 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ARL10Q8N8L6 244 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 WDR48Q8TAF3 677 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 TEX13AQ9BXU3 409 aaPredicted RBP10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 NSMCE4AQ9NXX6 385 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 NFIBO00712 420 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 GOLGA8MH3BSY2 632 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 EFTUD2Q15029 972 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■■■□□ 18.9
SPTBN1-201ENST00000333896 IRGCQ6NXR0 463 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 ZNF554Q86TJ5 538 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 STAMQ92783 540 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 NLRP4Q96MN2 994 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 CNPY3Q9BT09 278 aa10.97□□□□□ -0.65
SPTBN1-201ENST00000333896 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 POLR2FP61218 127 aaKnown RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 TMPRSS15P98073 1019 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 CCDC144BQ3MJ40 725 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 LRRC31Q6UY01 552 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 PRMT1Q99873 361 aaKnown RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 ARHGEF10LQ9HCE6 1279 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 HBS1LQ9Y450 684 aaKnown RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 KLHL2O95198 593 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 CHRNA3P32297 505 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 HADHAP40939 763 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 SLC39A14Q15043 492 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 MYOCDQ8IZQ8 938 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 FANCD2Q9BXW9 1451 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 LDHBP07195 334 aaKnown RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 TRIM49P0CI25 452 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 TRIM49CP0CI26 452 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 DARS2Q6PI48 645 aaKnown RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 OLFM1Q99784 485 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 PKP1Q13835 747 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 MMADHCQ9H3L0 296 aaPredicted RBP10.96□□□□□ -0.65
SPTBN1-201ENST00000333896 ADCY9O60503 1353 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 KRT77Q7Z794 578 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 RSPH1Q8WYR4 309 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 OSBPL8Q9BZF1 889 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 TAC1P20366 129 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 ATP4AP20648 1035 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 FAPQ12884 760 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 TAB1Q15750 504 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 RABGAP1LQ5R372 815 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 NYAP1Q6ZVC0 841 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 CABP7Q86V35 215 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms