RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ADAM17P78536 824 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 GDF6Q6KF10 455 aaPredicted RBP16.84■□□□□ 0.29
PRPF3-201ENST00000324862 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
PRPF3-201ENST00000324862 TAS1R3Q7RTX0 852 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 P2RX5Q93086 422 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 KATNAL1Q9BW62 490 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 STRA6Q9BX79 667 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 KCTD10Q9H3F6 313 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 DACH1Q9UI36 760 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 ZMYM2Q9UBW7 1377 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 DENND3A2RUS2 1198 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 PSMA7O14818 248 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 ZEB2O60315 1214 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 EDN1P05305 212 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
PRPF3-201ENST00000324862 NCKAP1LP55160 1127 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 MYL5Q02045 173 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 KIAA0319LQ8IZA0 1049 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 RNF149Q8NC42 400 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 DUSP9Q99956 384 aaKnown RBP16.84■□□□□ 0.29
PRPF3-201ENST00000324862 BPIFA3Q9BQP9 254 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 AKT3Q9Y243 479 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 GINS2Q9Y248 185 aa16.84■□□□□ 0.29
PRPF3-201ENST00000324862 IER5Q5VY09 327 aa16.83■□□□□ 0.28
PRPF3-201ENST00000324862 CENPPQ6IPU0 288 aa16.83■□□□□ 0.28
PRPF3-201ENST00000324862 PSPC1Q8WXF1 523 aaKnown RBP16.83■□□□□ 0.28
PRPF3-201ENST00000324862 WNT8BQ93098 351 aa16.83■□□□□ 0.28
PRPF3-201ENST00000324862 IFT74Q96LB3 600 aa16.83■□□□□ 0.28
PRPF3-201ENST00000324862 COL1A2P08123 1366 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 C17orf102A2RUQ5 167 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 CCNE1P24864 410 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 STIM1Q13586 685 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 PCSK9Q8NBP7 692 aaKnown RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 ENOX1Q8TC92 643 aaKnown RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 DNAJB3Q8WWF6 145 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 MINDY3Q9H8M7 445 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 MBLAC1A4D2B0 266 aaPredicted RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 CLIC2O15247 247 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 KPNA6O60684 536 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 CYP2C9P11712 490 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 RETREG2Q8NC44 543 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 DHTKD1Q96HY7 919 aaPredicted RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 CTAGE1Q96RT6 745 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 NTPCRQ9BSD7 190 aaKnown RBP16.82■□□□□ 0.28
PRPF3-201ENST00000324862 CDHR5Q9HBB8 845 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 GTF2IRD1Q9UHL9 959 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 MYH11P35749 1972 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 EVPLQ92817 2033 aa16.82■□□□□ 0.28
PRPF3-201ENST00000324862 MAGEB2O15479 319 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 IQCF3P0C7M6 154 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
PRPF3-201ENST00000324862 SMTNP53814 917 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 RTP1P59025 263 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 GTF2BQ00403 316 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 KNOP1Q1ED39 458 aaKnown RBP16.81■□□□□ 0.28
PRPF3-201ENST00000324862 ZCWPW2Q504Y3 356 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 TRMT13Q9NUP7 481 aaKnown RBP16.81■□□□□ 0.28
PRPF3-201ENST00000324862 ARHGAP28Q9P2N2 729 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 SCN10AQ9Y5Y9 1956 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 A0A087WZ62 844 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 RRN3P2A6NIE6 340 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 GOLGA6L19H0YKK7 550 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 HOXC8P31273 242 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 NAMPTP43490 491 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 BMT2Q1RMZ1 405 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 DEPTORQ8TB45 409 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
PRPF3-201ENST00000324862 SRRTQ9BXP5 876 aaKnown RBP16.81■□□□□ 0.28
PRPF3-201ENST00000324862 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 TBX20Q9UMR3 447 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
PRPF3-201ENST00000324862 CAVIN2O95810 425 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 DNM2P50570 870 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 NLRP11P59045 1033 aaKnown RBP16.8■□□□□ 0.28
PRPF3-201ENST00000324862 PTPN21Q16825 1174 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 ZSWIM2Q8NEG5 633 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 GLT1D1Q96MS3 346 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 IKBKBO14920 756 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
PRPF3-201ENST00000324862 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
PRPF3-201ENST00000324862 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms