RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 LPPQ93052 612 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
TPM3-204ENST00000323144 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 PIN4Q9Y237 131 aaKnown RBP13.87□□□□□ -0.19
TPM3-204ENST00000323144 FAM50BQ9Y247 325 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
TPM3-204ENST00000323144 TRIOO75962 3097 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 DCXO43602 365 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 B4GALT3O60512 393 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
TPM3-204ENST00000323144 JAK2O60674 1132 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 GPR37L1O60883 481 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
TPM3-204ENST00000323144 UBE3AQ05086 875 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 SPIRE1Q08AE8 756 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 DUSP6Q16828 381 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 KCNT2Q6UVM3 1135 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 TMEM173Q86WV6 379 aaPredicted RBP13.86□□□□□ -0.19
TPM3-204ENST00000323144 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 GTF3C6Q969F1 213 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 PPP2R3CQ969Q6 453 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 ZNF558Q96NG5 402 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 TCF25Q9BQ70 676 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 LXNQ9BS40 222 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 AAASQ9NRG9 546 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 ORC3Q9UBD5 711 aaPredicted RBP13.86□□□□□ -0.19
TPM3-204ENST00000323144 CDH22Q9UJ99 828 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 HCN4Q9Y3Q4 1203 aa13.86□□□□□ -0.19
TPM3-204ENST00000323144 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 HOXA2O43364 376 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 EYA4O95677 639 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 PSMC5P62195 406 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 COASYQ13057 564 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 ME3Q16798 604 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 LLGL2Q6P1M3 1020 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 SLC39A11Q8N1S5 342 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 BCL7CQ8WUZ0 217 aaPredicted RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 TLE6Q9H808 572 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 SUCLA2Q9P2R7 463 aaPredicted RBP13.85□□□□□ -0.19
TPM3-204ENST00000323144 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
TPM3-204ENST00000323144 TECTAO75443 2155 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 A0A0U1RQF3 1178 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 NT5C1B-RDH14C9J2C7 533 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM3-204ENST00000323144 KRT2P35908 639 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 PHKA2P46019 1235 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
TPM3-204ENST00000323144 ANAPC15P60006 121 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 EMC2Q15006 297 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 CSPP1Q1MSJ5 1256 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
TPM3-204ENST00000323144 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 ZNF410Q86VK4 478 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 MICAL1Q8TDZ2 1067 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 DYDC2Q96IM9 177 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 POP1Q99575 1024 aaKnown RBP13.84□□□□□ -0.19
TPM3-204ENST00000323144 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 GCOM2Q9BZD3 368 aaPredicted RBP13.84□□□□□ -0.19
TPM3-204ENST00000323144 MINDY3Q9H8M7 445 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
TPM3-204ENST00000323144 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 COL4A3BPQ9Y5P4 624 aa13.84□□□□□ -0.19
TPM3-204ENST00000323144 PRR33A8MZF0 331 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 ZBTB39O15060 712 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 ZC3H11AO75152 810 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM3-204ENST00000323144 PPM1AP35813 382 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
TPM3-204ENST00000323144 PLCB3Q01970 1234 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 KCNC3Q14003 757 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
TPM3-204ENST00000323144 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 RNF135Q8IUD6 432 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 TMEM143Q96AN5 459 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 LZTS1Q9Y250 596 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
TPM3-204ENST00000323144 XBP1P17861 261 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 SP100P23497 879 aaPredicted RBP13.82□□□□□ -0.2
TPM3-204ENST00000323144 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
TPM3-204ENST00000323144 BCAR1P56945 870 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
TPM3-204ENST00000323144 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
TPM3-204ENST00000323144 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms