RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 NOL7Q9UMY1 257 aaKnown RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 KIF3AQ9Y496 699 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 MED24O75448 989 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 FGFR1P11362 822 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 SFPQP23246 707 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 FERMT3Q86UX7 667 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 P2RX5Q93086 422 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 MTRQ99707 1265 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 C11orf84Q9BUA3 381 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 POLR3CQ9BUI4 534 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-202ENST00000320516 MINDY3Q9H8M7 445 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 ATP6V0A4Q9HBG4 840 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 TUFT1Q9NNX1 390 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 PCDHB6Q9Y5E3 794 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 KIAA1671Q9BY89 1806 aa11.08□□□□□ -0.64
CCDC65-202ENST00000320516 MUC3AQ02505 3323 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 A0A087WWV3 80 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 TBKBP1A7MCY6 615 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 GRM6O15303 877 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 ASAP2O43150 1006 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 DGAT1O75907 488 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
CCDC65-202ENST00000320516 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
CCDC65-202ENST00000320516 RPA1P27694 616 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC65-202ENST00000320516 MRPS5P82675 430 aaKnown RBP11.07□□□□□ -0.64
CCDC65-202ENST00000320516 TFF2Q03403 129 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 CUL4AQ13619 759 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 CAMK1Q14012 370 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
CCDC65-202ENST00000320516 PTPROQ16827 1216 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 CASD1Q96PB1 797 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 LMAN2LQ9H0V9 348 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 DACT1Q9NYF0 836 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 HCSTQ9UBK5 93 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 COG5Q9UP83 839 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 PLAGL2Q9UPG8 496 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 BRWD1Q9NSI6 2320 aa11.07□□□□□ -0.64
CCDC65-202ENST00000320516 TTC28Q96AY4 2481 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 EOMESO95936 686 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 ITGB1P05556 798 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 SRGAP2CP0DJJ0 459 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 ARL2P36404 184 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 PTGDRQ13258 359 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 TIGD5Q53EQ6 642 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 NAALADL2Q58DX5 795 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 LRRC55Q6ZSA7 311 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
CCDC65-202ENST00000320516 IGSF22Q8N9C0 903 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 RNF149Q8NC42 400 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 CWH43Q9H720 699 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
CCDC65-202ENST00000320516 AGPAT5Q9NUQ2 364 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 DBR1Q9UK59 544 aaKnown RBP11.06□□□□□ -0.64
CCDC65-202ENST00000320516 MYO7AQ13402 2215 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
CCDC65-202ENST00000320516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 HOXA2O43364 376 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 BMP1P13497 986 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 MUTP22033 750 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 HOXA11P31270 313 aaPredicted RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 PHKA2P46019 1235 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 PTENP60484 403 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 POU5F1BQ06416 359 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 MXD4Q14582 209 aaPredicted RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 COL19A1Q14993 1142 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 IL17AQ16552 155 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 ECM1Q16610 540 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 SPPL3Q8TCT6 385 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 ASAP3Q8TDY4 903 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 HLA-CQ95604 372 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 NACC1Q96RE7 527 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 ALG13Q9NP73 1137 aaKnown RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 PIN4Q9Y237 131 aaKnown RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
CCDC65-202ENST00000320516 LAD1O00515 517 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 ZNF623O75123 536 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 GLRA2P23416 452 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 DNAJB1P25685 340 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 PRPHP41219 470 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 PDIA5Q14554 519 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 RILPL1Q5EBL4 403 aa11.05□□□□□ -0.64
CCDC65-202ENST00000320516 TCEAL5Q5H9L2 206 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms