RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SOX10P56693 466 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 DLG4P78352 724 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 PPP2R5AQ15172 486 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 GLIPR1L2Q4G1C9 344 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 DNAAF5Q86Y56 855 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 SLC9A9Q8IVB4 645 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 KRT222Q8N1A0 295 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 ANKRD35Q8N283 1001 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 COG1Q8WTW3 980 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 CEP170P1Q96L14 293 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 ANKEF1Q9NU02 776 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 FBXL5Q9UKA1 691 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 SNX12Q9UMY4 172 aa8.26□□□□□ -1.09
IFT88-201ENST00000319980 BZW2Q9Y6E2 419 aaKnown RBP8.26□□□□□ -1.09
IFT88-201ENST00000319980 SSC5DA1L4H1 1573 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 ADM5C9JUS6 153 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 PDE2AO00408 941 aaPredicted RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 NCK2O43639 380 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 GFPT2O94808 682 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 MAPTP10636 758 aaKnown RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 KRT13P13646 458 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 GTF2BQ00403 316 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 ALCAMQ13740 583 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 NFRKBQ6P4R8 1299 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 OTUD6AQ7L8S5 288 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 RNF10Q8N5U6 811 aaKnown RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 MSANTD4Q8NCY6 345 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 ZSWIM2Q8NEG5 633 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 DCPSQ96C86 337 aaKnown RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 SNCAIPQ9Y6H5 919 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 NPTX2P47972 431 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 SMTNP53814 917 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 JAM2P57087 298 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 CNTN2Q02246 1040 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 CKAP4Q07065 602 aaKnown RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 DMP1Q13316 513 aaPredicted RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 NAB2Q15742 525 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 ALKBH5Q6P6C2 394 aaKnown RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 SMAP1Q8IYB5 467 aaPredicted RBP8.25□□□□□ -1.09
IFT88-201ENST00000319980 ATP6V0A1Q93050 837 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 CDHR1Q96JP9 859 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 SLC9A2Q9UBY0 812 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 DNAJC12Q9UKB3 198 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 CSADQ9Y600 493 aa8.25□□□□□ -1.09
IFT88-201ENST00000319980 GOLGA8IPA6NC78 632 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 GOLGA8JA6NMD2 632 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 PALMO75781 387 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 ZMYND10O75800 440 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SASH3O75995 380 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 PSAPP07602 524 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 STAT1P42224 750 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 DNA2P51530 1060 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 VAMP7P51809 220 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 ACTR2P61160 394 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 VSNL1P62760 191 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 MYL7Q01449 175 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 FSTL1Q12841 308 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 BRD3Q15059 726 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SH3D19Q5HYK7 790 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 INTS8Q75QN2 995 aaKnown RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 CREG2Q8IUH2 290 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 CCDC60Q8IWA6 550 aaPredicted RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 XXYLT1Q8NBI6 393 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 RDM1Q8NG50 284 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 OSBPL9Q96SU4 736 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SENP7Q9BQF6 1050 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 TIPINQ9BVW5 301 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 PRDM10Q9NQV6 1147 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 ADARB2Q9NS39 739 aaKnown RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 HSPBP1Q9NZL4 362 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 NAGPAQ9UK23 515 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 EMSYQ7Z589 1322 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 DENND3A2RUS2 1198 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 F8VZ95 297 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 KIF3CO14782 793 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 EVI5O60447 810 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 PRKCIP41743 596 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 GCLMP48507 274 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SP2Q02086 613 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 MYBPC2Q14324 1141 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 STXBP2Q15833 593 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 ARHGAP44Q17R89 818 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 LONRF2Q1L5Z9 754 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SEPT14Q6ZU15 432 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 CYFIP1Q7L576 1253 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 VPS36Q86VN1 386 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 TMEM161BQ8NDZ6 487 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 IWS1Q96ST2 819 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 TLR10Q9BXR5 811 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 STK33Q9BYT3 514 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms