RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TULP1O00294 542 aaPredicted RBP17■□□□□ 0.31
PDLIM5-202ENST00000318007 DNM2P50570 870 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 ZNF131P52739 623 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 EHHADHQ08426 723 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 LAMTOR4Q0VGL1 99 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 IFT74Q96LB3 600 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 TSPY26PQ9H489 355 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
PDLIM5-202ENST00000318007 COL1A2P08123 1366 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 IGKV6-21A0A0C4DH24 114 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 TMOD1P28289 359 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 ARL2P36404 184 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 GJA8P48165 433 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 NLRP7Q8WX94 980 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 FIZ1Q96SL8 496 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
PDLIM5-202ENST00000318007 B4GALT4O60513 344 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 NLRP11P59045 1033 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 ZNF445P59923 1031 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 COL13A1Q5TAT6 717 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 KIAA0319LQ8IZA0 1049 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 DEPTORQ8TB45 409 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 TSEN34Q9BSV6 310 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 PHF24Q9UPV7 400 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 A0A087WZ62 844 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 MAGEB2O15479 319 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 CABYRO75952 493 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 GNAT1P11488 350 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 GAP43P17677 238 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 EN2P19622 333 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 FGFR4P22455 802 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 PMS1P54277 932 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 ADAM17P78536 824 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 IER5Q5VY09 327 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 HAUS6Q7Z4H7 955 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 JPH2Q9BR39 696 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 CRISPLD2Q9H0B8 497 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 CDHR5Q9HBB8 845 aa16.98■□□□□ 0.31
PDLIM5-202ENST00000318007 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 MBLAC1A4D2B0 266 aaPredicted RBP16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 PPP1R3GB7ZBB8 358 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 TISP43B9A030 160 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 SMTNP53814 917 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 ZNF720Q7Z2F6 126 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 LUZP1Q86V48 1076 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 OSMRQ99650 979 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 ZNF165P49910 485 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-202ENST00000318007 INO80B-WBP1J3KQ70 363 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 THPOP40225 353 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 MYOCDQ8IZQ8 938 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 LINC01465Q8N7H1 131 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 TMEM161BQ8NDZ6 487 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 NELFBQ8WX92 580 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 INO80BQ9C086 356 aaPredicted RBP16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 MINDY3Q9H8M7 445 aa16.96■□□□□ 0.31
PDLIM5-202ENST00000318007 ARVCFO00192 962 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 HOXC8P31273 242 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 NAMPTP43490 491 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 NCKAP1LP55160 1127 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 MXD4Q14582 209 aaPredicted RBP16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 CDR2LQ86X02 465 aaPredicted RBP16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 EXOC8Q8IYI6 725 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 SYCP3Q8IZU3 236 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 ADSSL1Q8N142 457 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 SEL1LQ9UBV2 794 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 SMIM35A0A1B0GVV1 85 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 EDN1P05305 212 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 IQCF3P0C7M6 154 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 HOXD13P35453 343 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 GPC3P51654 580 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 PSMD2Q13200 908 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 STIM1Q13586 685 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 MLKLQ8NB16 471 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 BICD1Q96G01 975 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 ANP32EQ9BTT0 268 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 ATP11BQ9Y2G3 1177 aa16.95■□□□□ 0.3
PDLIM5-202ENST00000318007 CLIC2O15247 247 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 PAK1Q13153 545 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
PDLIM5-202ENST00000318007 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms