RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 NT5C1BQ96P26 610 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 DUSP9Q99956 384 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 MKNK1Q9BUB5 465 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 OSBPL1AQ9BXW6 950 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 CXCL16Q9H2A7 254 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ARFGEF1Q9Y6D6 1849 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 LRRK2Q5S007 2527 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 COL5A2P05997 1499 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 E2F6O75461 281 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 CIB2O75838 187 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 OATP04181 439 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 STMN1P16949 149 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R2P41236 205 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 MMP14P50281 582 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 CKAP4Q07065 602 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 LONRF2Q1L5Z9 754 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ZDHHC14Q8IZN3 488 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 KIFC3Q9BVG8 833 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TOPORSQ9NS56 1045 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 C6orf203Q9P0P8 240 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 CCDC189A1A4V9 331 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 GOLGA8IPA6NC78 632 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 GOLGA8JA6NMD2 632 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 DDX3XO00571 662 aaKnown RBP eCLIP3.9□□□□□ -1.79
GEN1-201ENST00000317402 PDE8AO60658 829 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 H2AFXP16104 143 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 ATP2A2P16615 1042 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 LMNB1P20700 586 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ECE1P42892 770 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 IRX4P78413 519 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TUBB2AQ13885 445 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ZC2HC1CQ53FD0 456 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 AFAP1L2Q8N4X5 818 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 SNRNP27Q8WVK2 155 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 TUBB2BQ9BVA1 445 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 NDEL1Q9GZM8 345 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TMOD2Q9NZR1 351 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L15C9J2P7 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L13C9JLJ4 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L11C9JVI0 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L18D6R9N7 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L22D6RA61 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L17D6RBQ6 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L19D6RCP7 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L20D6RJB6 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 SORBS2O94875 1100 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 NTSR2O95665 410 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 KRT75O95678 551 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 PCCAP05165 728 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 TCF4P15884 667 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ALDH3A1P30838 453 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 HPDP32754 393 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 IGBP1P78318 339 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ADCY2Q08462 1091 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 SSRP1Q08945 709 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 USP17L24Q0WX57 530 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 KCNV1Q6PIU1 500 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 RBM43Q6ZSC3 357 aaKnown RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 EEPD1Q7L9B9 569 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 IGSF22Q8N9C0 903 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 OSBPL9Q96SU4 736 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 H0YC42 278 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 CYP3A4P08684 503 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 MARCKSL1P49006 195 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TPD52P55327 224 aaPredicted RBP3.9□□□□□ -1.79
GEN1-201ENST00000317402 MAP3K9P80192 1104 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 CRYMQ14894 314 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R7Q15435 360 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TSHZ1Q6ZSZ6 1077 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 FAM71BQ8TC56 605 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 TTC1Q99614 292 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ITM2BQ9Y287 266 aa3.9□□□□□ -1.79
GEN1-201ENST00000317402 ZC3H4Q9UPT8 1303 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 BICDL2A1A5D9 508 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 BMP1P13497 986 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 VASPP50552 380 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 DLG4P78352 724 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 STX1AQ16623 288 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PRR16Q569H4 304 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 OTUD6AQ7L8S5 288 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 OGFOD1Q8N543 542 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 QTRT2Q9H974 415 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 RMND1Q9NWS8 449 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TSKSQ9UJT2 592 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PACSIN3Q9UKS6 424 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R9AQ9ULJ8 1098 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 E7EVH7 732 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ZBTB43O43298 467 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 IARSP41252 1262 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 RASSF7Q02833 373 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SOGA3Q5TF21 947 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 VSTM4Q8IW00 320 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ATP11CQ8NB49 1132 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.89□□□□□ -1.79
GEN1-201ENST00000317402 MTMR8Q96EF0 704 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 CAPS2Q9BXY5 557 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 BCAP29Q9UHQ4 241 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TRIM17Q9Y577 477 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms