RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 SRRM3A6NNA2 597 aaPredicted RBP21.05■□□□□ 0.96
ZNF554-201ENST00000317243 SLITRK3O94933 977 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 KLHL30Q0D2K2 578 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 MEI1Q5TIA1 1274 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 TCERG1LQ5VWI1 586 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 C1orf131Q8NDD1 294 aaKnown RBP21.05■□□□□ 0.96
ZNF554-201ENST00000317243 RAPGEF5Q92565 580 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 HDAC9Q9UKV0 1011 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 TMX2Q9Y320 296 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 PCDHB13Q9Y5F0 798 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 MGRN1O60291 552 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 DPEP1P16444 411 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 HSPA9P38646 679 aaKnown RBP21.05■□□□□ 0.96
ZNF554-201ENST00000317243 HIBCHQ6NVY1 386 aaPredicted RBP21.05■□□□□ 0.96
ZNF554-201ENST00000317243 TAF4BQ92750 862 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 AP1M1Q9BXS5 423 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 NOD2Q9HC29 1040 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 RABGAP1Q9Y3P9 1069 aa21.05■□□□□ 0.96
ZNF554-201ENST00000317243 ASTN1O14525 1302 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 RXRBP28702 533 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 EPS15P42566 896 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 SLC18A3Q16572 532 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 RINT1Q6NUQ1 792 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 OTOP1Q7RTM1 612 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 DEFB132Q7Z7B7 95 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 THOC1Q96FV9 657 aaKnown RBP21.04■□□□□ 0.96
ZNF554-201ENST00000317243 INPP4AQ96PE3 977 aaPredicted RBP21.04■□□□□ 0.96
ZNF554-201ENST00000317243 GLT8D2Q9H1C3 349 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 HOMER2Q9NSB8 354 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 FZD1Q9UP38 647 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 GRID2IPA4D2P6 1211 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 DCDC2CA8MYV0 355 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 RBAK-RBAKDNI3L0D1 243 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 TULP1O00294 542 aaPredicted RBP21.04■□□□□ 0.96
ZNF554-201ENST00000317243 ATP6V1G2O95670 118 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 ELF3P78545 371 aaPredicted RBP21.04■□□□□ 0.96
ZNF554-201ENST00000317243 PPP1R7Q15435 360 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 CPLX4Q7Z7G2 160 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 USP38Q8NB14 1042 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 IL31RAQ8NI17 732 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 STAMBPL1Q96FJ0 436 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 GMLQ99445 158 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 PLCB1Q9NQ66 1216 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 TMOD2Q9NZR1 351 aa21.04■□□□□ 0.96
ZNF554-201ENST00000317243 CTNNA1P35221 906 aaKnown RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 TNNC1P63316 161 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 ZNF844Q08AG5 666 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 UAP1Q16222 522 aaPredicted RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 KNOP1Q1ED39 458 aaKnown RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 EGFL6Q8IUX8 553 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 COL20A1Q9P218 1284 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 TMEM150BA6NC51 233 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 CEP104O60308 925 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 KCNA3P22001 575 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 CIITAP33076 1130 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 ERVK-9P63128 1117 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 MYO1EQ12965 1108 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 CHADLQ6NUI6 762 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 MOXD1Q6UVY6 613 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 EPM2AIP1Q7L775 607 aaPredicted RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 CCT6BQ92526 530 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 GANQ9H2C0 597 aa21.03■□□□□ 0.96
ZNF554-201ENST00000317243 NOVA2Q9UNW9 492 aaKnown RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 ASTN2O75129 1339 aaPredicted RBP21.03■□□□□ 0.96
ZNF554-201ENST00000317243 H0YGN5 161 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 CETN3O15182 167 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 IFFO1Q0D2I5 559 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 LACTB2Q53H82 288 aaPredicted RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 GKAP1Q5VSY0 366 aaPredicted RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 DPY19L2P1Q6NXN4 242 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 CPXCR1Q8N123 301 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 ERMNQ8TAM6 284 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 NSMCE1Q8WV22 266 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 FAM20AQ96MK3 541 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 NAP1L4Q99733 375 aaKnown RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 HSD17B14Q9BPX1 270 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 NFS1Q9Y697 457 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 TNS1Q9HBL0 1735 aaKnown RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 TISP43B9A030 160 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 NFIBO00712 420 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 BUB1BO60566 1050 aaPredicted RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 BIRC2Q13490 618 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 RPS6KA1Q15418 735 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 ZNF772Q68DY9 489 aaPredicted RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 RBM46Q8TBY0 533 aaKnown RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 FAM151AQ8WW52 585 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 TATDN2Q93075 761 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 RSRC1Q96IZ7 334 aaKnown RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 CEP63Q96MT8 703 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 EDEM3Q9BZQ6 932 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 UNC45AQ9H3U1 944 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 TAF1DQ9H5J8 278 aaPredicted RBP21.02■□□□□ 0.96
ZNF554-201ENST00000317243 PCDHGC5Q9Y5F6 944 aa21.02■□□□□ 0.96
ZNF554-201ENST00000317243 PSMD10O75832 226 aa21.01■□□□□ 0.95
ZNF554-201ENST00000317243 FOSP01100 380 aaPredicted RBP21.01■□□□□ 0.95
ZNF554-201ENST00000317243 PPP2R2AP63151 447 aa21.01■□□□□ 0.95
ZNF554-201ENST00000317243 LDHDQ86WU2 507 aa21.01■□□□□ 0.95
ZNF554-201ENST00000317243 OGFOD1Q8N543 542 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms