RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 NAIF1Q69YI7 327 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-201ENST00000309428 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 M0R2N6 131 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 HIP1RO75146 1068 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CTNNA2P26232 953 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 PEX3P56589 373 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 USTQ9Y2C2 406 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CCDC160A6NGH7 325 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 MXRA7P84157 204 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 XKR9Q5GH70 373 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 AGPSO00116 658 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 SLC16A4O15374 487 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 SERPING1P05155 500 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 KRT15P19012 456 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
RETREG3-201ENST00000309428 UBE2TQ9NPD8 197 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-201ENST00000309428 DBR1Q9UK59 544 aaKnown RBP13.67□□□□□ -0.22
RETREG3-201ENST00000309428 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 WDR91A4D1P6 747 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 FGFR4P22455 802 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 HSD17B3P37058 310 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 CYFIP1Q7L576 1253 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 PSMD1Q99460 953 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 RAB17Q9H0T7 212 aa13.67□□□□□ -0.22
RETREG3-201ENST00000309428 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
RETREG3-201ENST00000309428 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 MEIS2O14770 477 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
RETREG3-201ENST00000309428 TAF11Q15544 211 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 KNOP1Q1ED39 458 aaKnown RBP13.66□□□□□ -0.22
RETREG3-201ENST00000309428 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 GLG1Q92896 1179 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 NFIBO00712 420 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-201ENST00000309428 UPP2O95045 317 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 FAM107AO95990 144 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 UCHL3P15374 230 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 LRRC55Q6ZSA7 311 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 LXNQ9BS40 222 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-201ENST00000309428 BIRC3Q13489 604 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 ARSHQ5FYA8 562 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 NSMCE1Q8WV22 266 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
RETREG3-201ENST00000309428 ZNF233A6NK53 670 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 POC1B-GALNT4F8VUJ3 575 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 TLR2O60603 784 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 SMIM24O75264 130 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 ITGA4P13612 1032 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 PPP1R2P41236 205 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 CETN1Q12798 172 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 SLFN12Q8IYM2 578 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 ZSWIM2Q8NEG5 633 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 NEK9Q8TD19 979 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 PRMT1Q99873 361 aaKnown RBP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 TLR10Q9BXR5 811 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 KLHL14Q9P2G3 628 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 DNAJC12Q9UKB3 198 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 GINS2Q9Y248 185 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 BCL9LQ86UU0 1499 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 AARSP49588 968 aaKnown RBP eCLIP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 EAPPQ56P03 285 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 SLC30A5Q8TAD4 765 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 AENQ8WTP8 325 aaKnown RBP13.65□□□□□ -0.22
RETREG3-201ENST00000309428 PI4K2AQ9BTU6 479 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 SIK3Q9Y2K2 1263 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 C4AP0C0L4 1744 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 C4BP0C0L5 1744 aa13.65□□□□□ -0.22
RETREG3-201ENST00000309428 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.23
RETREG3-201ENST00000309428 EVI5O60447 810 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 IFNB1P01574 187 aa13.65□□□□□ -0.23
RETREG3-201ENST00000309428 CHN1P15882 459 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms