RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 BSPRYQ5W0U4 402 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 TMEM270Q6UE05 265 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ATG4CQ96DT6 458 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 KRT1P04264 644 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 PHBP35232 272 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 RPS6P62753 249 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 CCDC6Q16204 474 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 GPD1LQ8N335 351 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 PSMD1Q99460 953 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 H7C0C1 242 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ACTN1P12814 892 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ATP5OP48047 213 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 RHBDL3P58872 404 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 TTI2Q6NXR4 508 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 SCINQ9Y6U3 715 aa12.29□□□□□ -0.44
PCDHGC3-201ENST00000308177 GAKO14976 1311 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 PLSCR1O15162 318 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 MED24O75448 989 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 FMO5P49326 533 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 KLK7P49862 253 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 CUL1Q13616 776 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 KIF22Q14807 665 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ERICH1Q86X53 443 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 FMO2Q99518 471 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 HSPBP1Q9NZL4 362 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 AGO2Q9UKV8 859 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ATRNO75882 1429 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SGK1O00141 431 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 HGSO14964 777 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ICAM1P05362 532 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 PLS3P13797 630 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ARHGAP25P42331 645 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 STAT5BP51692 787 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 TKFCQ3LXA3 575 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ALS2CLQ60I27 953 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 RFX6Q8HWS3 928 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 A0A1W2PQJ5 194 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SLC9A1P19634 815 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 COPB2P35606 906 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 PHKA2P46019 1235 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 CXCL9Q07325 125 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 PPP2R5DQ14738 602 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 CDKAL1Q5VV42 579 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 CATSPER4Q7RTX7 472 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 TMEM35BQ8NCS4 154 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 MMP19Q99542 508 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 GINM1Q9NU53 330 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 PACSIN2Q9UNF0 486 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 A6NJR5 290 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 EIF3DO15371 548 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 RFFLQ8WZ73 363 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SPATA33Q96N06 139 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 RBAKQ9NYW8 714 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
PCDHGC3-201ENST00000308177 MAFGO15525 162 aa12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 STK33Q9BYT3 514 aa12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 SPON1Q9HCB6 807 aa12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 SNX12Q9UMY4 172 aa12.27□□□□□ -0.44
PCDHGC3-201ENST00000308177 ZNF18P17022 549 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 CFAP157Q5JU67 520 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 OR6B2Q6IFH4 312 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 ENOSF1Q7L5Y1 443 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF668Q96K58 619 aaPredicted RBP12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 A0A087X0B3 334 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 PABPN1LA6NDY0 278 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms