RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 GJB4Q9NTQ9 266 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 A0A087WZ62 844 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 TMEM150BA6NC51 233 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 PI4K2BG5E9Z4 385 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 IRS1P35568 1242 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 RAB27AP51159 221 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 ZNF598Q86UK7 904 aaKnown RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 ADHFE1Q8IWW8 467 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 MICAL1Q8TDZ2 1067 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 TCP11Q8WWU5 503 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 TNFRSF25Q93038 417 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 ZNF668Q96K58 619 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 ZNF558Q96NG5 402 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 FDXACB1Q9BRP7 624 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 LXNQ9BS40 222 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 DHX33Q9H6R0 707 aaKnown RBP18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 CD207Q9UJ71 328 aa18.65■□□□□ 0.58
TRAPPC1-201ENST00000303731 TBX10O75333 385 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 CSPG5O95196 566 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 SRGAP2BP0DMP2 458 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 ALADP13716 330 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 YWHABP31946 246 aaKnown RBP18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 NRIP1P48552 1158 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 KRT17Q04695 432 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 ZP2Q05996 745 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 NR5A1Q13285 461 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 TMEM31Q5JXX7 168 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 PLA2G4FQ68DD2 849 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 KCNT2Q6UVM3 1135 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 RNF169Q8NCN4 708 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 PSPC1Q8WXF1 523 aaKnown RBP18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 MRPS27Q92552 414 aaKnown RBP18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 SH2D3AQ9BRG2 576 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 EPHX3Q9H6B9 360 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 TLE6Q9H808 572 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 NGRNQ9NPE2 291 aaKnown RBP18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 CD320Q9NPF0 282 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 RNF19AQ9NV58 838 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
TRAPPC1-201ENST00000303731 ASAP2O43150 1006 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 MBTPS2O43462 519 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 GPR37L1O60883 481 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 LARGE1O95461 756 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 EYA4O95677 639 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 FGFR4P22455 802 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 PHKA2P46019 1235 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 DLX2Q07687 328 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 SPIRE1Q08AE8 756 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 COASYQ13057 564 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 EARS2Q5JPH6 523 aaKnown RBP18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 TWF2Q6IBS0 349 aaKnown RBP18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 NCAPH2Q6IBW4 605 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 CATSPER4Q7RTX7 472 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 DIS3L2Q8IYB7 885 aaKnown RBP18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 MSLNLQ96KJ4 702 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 NLRP4Q96MN2 994 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 PCDHA12Q9UN75 941 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 PIN4Q9Y237 131 aaKnown RBP18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 ARID2Q68CP9 1835 aa18.63■□□□□ 0.57
TRAPPC1-201ENST00000303731 C19orf67A6NJJ6 358 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 FSCN2O14926 492 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 LINC01565O15544 149 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 NEMFO60524 1076 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 NPEPPSP55786 919 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 BMS1Q14692 1282 aaKnown RBP18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 PCBP1Q15365 356 aaKnown RBP eCLIP18.62■□□□□ 0.571e-7■■■■□ 23.7
TRAPPC1-201ENST00000303731 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 CALCRLQ16602 461 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 CLLU1OSQ5K130 101 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 LRRC55Q6ZSA7 311 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 SRGAP1Q7Z6B7 1085 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 SPG21Q9NZD8 308 aa18.62■□□□□ 0.57
TRAPPC1-201ENST00000303731 BTBD18B2RXH4 712 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 ZNF623O75123 536 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 CSDE1O75534 798 aaKnown RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 LYPLA2O95372 231 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 ATF7P17544 494 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 ALDH7A1P49419 539 aaKnown RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 EMC2Q15006 297 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 CLUL1Q15846 466 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 DUSP6Q16828 381 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 GLB1LQ6UWU2 654 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 SMRP1Q8NCR6 262 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 HELQQ8TDG4 1101 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 PRPF31Q8WWY3 499 aaKnown RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 PGBD4Q96DM1 585 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 DYDC2Q96IM9 177 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 IFT122Q9HBG6 1241 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 AGPAT5Q9NUQ2 364 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 FAM105AQ9NUU6 356 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 WRAP73Q9P2S5 460 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 HCSTQ9UBK5 93 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 LIMCH1Q9UPQ0 1083 aa18.61■□□□□ 0.57
TRAPPC1-201ENST00000303731 FAM205CA6NFA0 338 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms