RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 HAUS1Q96CS2 278 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 SLC24A3Q9HC58 644 aa15.17■□□□□ 0.02
SDC2-201ENST00000302190 GPR75-ASB3A0A0A6YYF3 556 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 SSU72P8A0A1W2PR75 194 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 AKAP3O75969 853 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 ZNF571Q7Z3V5 609 aaPredicted RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.16■□□□□ 0.022e-15■□□□□ 8.7
SDC2-201ENST00000302190 TEKT3Q9BXF9 490 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 VPS37BQ9H9H4 285 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 PNMA2Q9UL42 364 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 CD19P15391 556 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 MXI1P50539 228 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 NAB2Q15742 525 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 WDR44Q5JSH3 913 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 MMGT1Q8N4V1 131 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 CERS5Q8N5B7 392 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 SLC35G2Q8TBE7 412 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 NEK9Q8TD19 979 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 ANKFY1Q9P2R3 1169 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 NAGPAQ9UK23 515 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 SLX4Q8IY92 1834 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 BAZ2AQ9UIF9 1905 aaKnown RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 NDUFB10O96000 172 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 FOSP01100 380 aaPredicted RBP15.16■□□□□ 0.02
SDC2-201ENST00000302190 ECM1Q16610 540 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 ZFPM1Q8IX07 1006 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 C1orf54Q8WWF1 131 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 RUSC1Q9BVN2 902 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 GINS2Q9Y248 185 aa15.16■□□□□ 0.02
SDC2-201ENST00000302190 A6NNZ2 444 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 HMGB1P1B2RPK0 211 aaPredicted RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 SLC16A4O15374 487 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 COG2Q14746 738 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 TUBB8Q3ZCM7 444 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 FAM47EQ6ZV65 393 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 USP38Q8NB14 1042 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 FBF1Q8TES7 1133 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 IMPG2Q9BZV3 1241 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 AZI2Q9H6S1 392 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 ANKRD31Q8N7Z5 1873 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 MMEP08473 750 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 CLNS1AP54105 237 aaKnown RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 SGO2Q562F6 1265 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 PPP4R3AQ6IN85 833 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 KIFAP3Q92845 792 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 TYW1Q9NV66 732 aaKnown RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 IKBKGQ9Y6K9 419 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 ZNF831Q5JPB2 1677 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 SCP2P22307 547 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 GSCP56915 257 aaPredicted RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 MEA1Q16626 185 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 RPUSD2Q8IZ73 545 aaKnown RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 CEP120Q8N960 986 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 RNF217Q8TC41 542 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 CHURC1Q8WUH1 139 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 BTBD6Q96KE9 485 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 STMN4Q9H169 189 aaPredicted RBP15.15■□□□□ 0.02
SDC2-201ENST00000302190 PLCB1Q9NQ66 1216 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 EMSYQ7Z589 1322 aa15.15■□□□□ 0.02
SDC2-201ENST00000302190 CHD4Q14839 1912 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 HNRNPH1P31943 449 aaKnown RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.019e-14■□□□□ 8.9
SDC2-201ENST00000302190 GLE1Q53GS7 698 aaKnown RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 USP37Q86T82 979 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 ZNF668Q96K58 619 aaPredicted RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 GMNCA6NCL1 334 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 HSD17B3P37058 310 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 NUGGCQ68CJ6 796 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 INTS8Q75QN2 995 aaKnown RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 CCDC197Q8NCU1 140 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 FBXO28Q9NVF7 368 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
SDC2-201ENST00000302190 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 SIK3Q9Y2K2 1263 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
SDC2-201ENST00000302190 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 WDR91A4D1P6 747 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 GRID2IPA4D2P6 1211 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 RASGRF2O14827 1237 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 PDE6CP51160 858 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 DYNLT1P63172 113 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 TRAF1Q13077 416 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 BCAS3Q9H6U6 928 aa15.14■□□□□ 0.01
SDC2-201ENST00000302190 ZNF148Q9UQR1 794 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms