RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 H0Y3Z8 333 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 RASSF9O75901 435 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 GCKRQ14397 625 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 AKIRIN2Q53H80 203 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 TADA2AO75478 443 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
SLX4-201ENST00000294008 ERFP50548 548 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 ATP12AP54707 1039 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 CTSWP56202 376 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 PEX3P56589 373 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 HEMGNQ9BXL5 484 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 SLC13A1Q9BZW2 595 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 SH3BP1Q9Y3L3 701 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 RUNDC3BQ96NL0 473 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 FAM167BQ9BTA0 163 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 SPTLC1O15269 473 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 FKBP9O95302 570 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 FKBP9P1Q75LS8 142 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 XPO4Q9C0E2 1151 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 COPEO14579 308 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 TLR2O60603 784 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 CBFBQ13951 182 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 SPATA16Q9BXB7 569 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 EXOSC4Q9NPD3 245 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 PCSK1NQ9UHG2 260 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 CYP7B1O75881 506 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 HPGDP15428 266 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 ATL3Q6DD88 541 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 BZW1Q7L1Q6 419 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 FBXL21Q9UKT6 434 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 CCDC151A5D8V7 595 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 ITGAXP20702 1163 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 CDC16Q13042 620 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 UXS1Q8NBZ7 420 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 STN1Q9H668 368 aaKnown RBP13.22□□□□□ -0.29
SLX4-201ENST00000294008 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
SLX4-201ENST00000294008 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 RLBP1P12271 317 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 ZNF667Q5HYK9 610 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 H2AFJQ9BTM1 129 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 TOMM70O94826 608 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 SERPINB4P48594 390 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 KPNA1P52294 538 aaPredicted RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 TMEM154Q6P9G4 183 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 BEST2Q8NFU1 509 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 ECT2Q9H8V3 914 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 TTC7AQ9ULT0 858 aaPredicted RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 APOBEC2Q9Y235 224 aaKnown RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 PKP3Q9Y446 797 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 M0QYV0 167 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 DGKHQ86XP1 1220 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 SLC44A2Q8IWA5 706 aaPredicted RBP13.21□□□□□ -0.29
SLX4-201ENST00000294008 APPL1Q9UKG1 709 aa13.21□□□□□ -0.29
SLX4-201ENST00000294008 NOS1P29475 1434 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 E7EWF7 191 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.3
SLX4-201ENST00000294008 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.3
SLX4-201ENST00000294008 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.3
SLX4-201ENST00000294008 ARL8AQ96BM9 186 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 MMP19Q99542 508 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 APOL5Q9BWW9 433 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 FLT3P36888 993 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 PLCL1Q15111 1095 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 ZSCAN26Q16670 478 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 SLC25A24Q6NUK1 477 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 USP33Q8TEY7 942 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.3
SLX4-201ENST00000294008 V9GYQ6 96 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 TNRQ92752 1358 aa13.21□□□□□ -0.3
SLX4-201ENST00000294008 ZBTB7AO95365 584 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 HDAC4P56524 1084 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 ZNF699Q32M78 642 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 ICE2Q659A1 982 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 CENPUQ71F23 418 aa13.2□□□□□ -0.3
SLX4-201ENST00000294008 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms