RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 HOXA2O43364 376 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 SLITRK3O94933 977 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 EOMESO95936 686 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 IL9P15248 144 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNF8-201ENST00000290330 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.53
SNF8-201ENST00000290330 CALCRLQ16602 461 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
SNF8-201ENST00000290330 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
SNF8-201ENST00000290330 LRRC55Q6ZSA7 311 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
SNF8-201ENST00000290330 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 FAM178BQ8IXR5 827 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 NLRP4Q96MN2 994 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
SNF8-201ENST00000290330 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 CD320Q9NPF0 282 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 CHST12Q9NRB3 414 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 PPME1Q9Y570 386 aa11.71□□□□□ -0.53
SNF8-201ENST00000290330 MYO7AQ13402 2215 aa11.71□□□□□ -0.54
SNF8-201ENST00000290330 ZBTB39O15060 712 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 NEMFO60524 1076 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 FGF18O76093 207 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 LAG3P18627 525 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 SFPQP23246 707 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNF8-201ENST00000290330 RFC5P40937 340 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 TXKP42681 527 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 POLGP54098 1239 aaPredicted RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 GUCY1B3Q02153 619 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 UBE3AQ05086 875 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 DLX2Q07687 328 aaPredicted RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 CLLU1OSQ5K130 101 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 TPH2Q8IWU9 490 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 THNSL1Q8IYQ7 743 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 ABI1Q8IZP0 508 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 COLGALT1Q8NBJ5 622 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 TMEM143Q96AN5 459 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 LLPHQ9BRT6 129 aaKnown RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 TRAIPQ9BWF2 469 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
SNF8-201ENST00000290330 COL4A3BPQ9Y5P4 624 aa11.7□□□□□ -0.54
SNF8-201ENST00000290330 LINC01565O15544 149 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 TBX10O75333 385 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 LYPLA2O95372 231 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 PHKA2P46019 1235 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 ADAM15Q13444 863 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 EMC2Q15006 297 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNF8-201ENST00000290330 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 XKR9Q5GH70 373 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 LRRC43Q8N309 656 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 PRPF31Q8WWY3 499 aaKnown RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 PPP2R3CQ969Q6 453 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 C8orf76Q96K31 380 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 ZSCAN31Q96LW9 406 aaPredicted RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 TMEM60Q9H2L4 133 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
SNF8-201ENST00000290330 FNDC1Q4ZHG4 1894 aaPredicted RBP11.69□□□□□ -0.54
SNF8-201ENST00000290330 KIAA1671Q9BY89 1806 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 SRGAP2CP0DJJ0 459 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 ATP2B1P20020 1258 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 MCM7P33993 719 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 NRIP1P48552 1158 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 ERVFC1P60507 584 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 LAMTOR4Q0VGL1 99 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 TWF2Q6IBS0 349 aaKnown RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 KCNT2Q6UVM3 1135 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 RBM23Q86U06 439 aaKnown RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 GJD3Q8N144 294 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 EFHBQ8N7U6 833 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 MRPS27Q92552 414 aaKnown RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.548e-7■□□□□ 9
SNF8-201ENST00000290330 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 MINDY3Q9H8M7 445 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms