RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RNF169Q8NCN4 708 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 DYDC2Q96IM9 177 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 LXNQ9BS40 222 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 GCOM2Q9BZD3 368 aaPredicted RBP10.69□□□□□ -0.7
HMHB1-201ENST00000289448 TMEM117Q9H0C3 514 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 DHX33Q9H6R0 707 aaKnown RBP10.69□□□□□ -0.7
HMHB1-201ENST00000289448 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 C11orf16Q9NQ32 467 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 CLEC1BQ9P126 229 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 PCDHB12Q9Y5F1 795 aa10.69□□□□□ -0.7
HMHB1-201ENST00000289448 WDFY4Q6ZS81 3184 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 MEIS3P2A8K0S8 358 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 FSCN2O14926 492 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 PER2O15055 1255 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 SLITRK3O94933 977 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 CYP4A11Q02928 519 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 ZP2Q05996 745 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 ZNF410Q86VK4 478 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 C4orf19Q8IY42 314 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 DIS3L2Q8IYB7 885 aaKnown RBP10.68□□□□□ -0.7
HMHB1-201ENST00000289448 THNSL1Q8IYQ7 743 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 EFHBQ8N7U6 833 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 HELQQ8TDG4 1101 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 PRPF31Q8WWY3 499 aaKnown RBP10.68□□□□□ -0.7
HMHB1-201ENST00000289448 MSLNLQ96KJ4 702 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 CEP170P1Q96L14 293 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 NLRP4Q96MN2 994 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 KIF2CQ99661 725 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 NAP1L4Q99733 375 aaKnown RBP10.68□□□□□ -0.7
HMHB1-201ENST00000289448 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 MINDY3Q9H8M7 445 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
HMHB1-201ENST00000289448 RNF216Q9NWF9 866 aaPredicted RBP10.68□□□□□ -0.7
HMHB1-201ENST00000289448 MUC6Q6W4X9 2439 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 PLXNA4Q9HCM2 1894 aa10.68□□□□□ -0.7
HMHB1-201ENST00000289448 A0A087WWV3 80 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 FAM86C2PA6NEL3 165 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 PI4K2BG5E9Z4 385 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 HOXA2O43364 376 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 MBTPS2O43462 519 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 MARCH6O60337 910 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 EOMESO95936 686 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 LAG3P18627 525 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
HMHB1-201ENST00000289448 PHKA2P46019 1235 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 CDC42EP1Q00587 391 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 PLCB3Q01970 1234 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 GUCY1B3Q02153 619 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 UBE3AQ05086 875 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 LAMTOR4Q0VGL1 99 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
HMHB1-201ENST00000289448 CCDC83Q8IWF9 413 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 SLFN12Q8IYM2 578 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 LRRC43Q8N309 656 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 SLC7A3Q8WY07 619 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 LPPQ93052 612 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 MTMR9Q96QG7 549 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 EIF2AK1Q9BQI3 630 aaKnown RBP10.67□□□□□ -0.7
HMHB1-201ENST00000289448 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 C1QTNF1Q9BXJ1 281 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 ZSWIM4Q9H7M6 989 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 XPNPEP1Q9NQW7 623 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 CD207Q9UJ71 328 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 BARX2Q9UMQ3 279 aaPredicted RBP10.67□□□□□ -0.7
HMHB1-201ENST00000289448 LIMCH1Q9UPQ0 1083 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 PIN4Q9Y237 131 aaKnown RBP10.67□□□□□ -0.7
HMHB1-201ENST00000289448 COL4A3BPQ9Y5P4 624 aa10.67□□□□□ -0.7
HMHB1-201ENST00000289448 HIDE1A8MVS5 230 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 DKC1O60832 514 aaKnown RBP eCLIP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 BAG4O95429 457 aaKnown RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 EYA4O95677 639 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 SRGAP2CP0DJJ0 459 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 SFPQP23246 707 aaKnown RBP eCLIP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 HOXA11P31270 313 aaPredicted RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 SSTR3P32745 418 aaPredicted RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 RFC5P40937 340 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 TXKP42681 527 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 NDUFV1P49821 464 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 POLGP54098 1239 aaPredicted RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 EMC2Q15006 297 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 CALCRLQ16602 461 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 XKR9Q5GH70 373 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 PLPP4Q5VZY2 271 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 TWF2Q6IBS0 349 aaKnown RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 CATSPER4Q7RTX7 472 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms