RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 RNF149Q8NC42 400 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 MINDY3Q9H8M7 445 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 PRDM6Q9NQX0 595 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 LAD1O00515 517 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 GTPBP6O43824 516 aaPredicted RBP22.8■■□□□ 1.24
RAB28-201ENST00000288723 GAS2O43903 313 aaKnown RBP22.8■■□□□ 1.24
RAB28-201ENST00000288723 FGFR1P11362 822 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 DTHD1Q6ZMT9 781 aa22.8■■□□□ 1.24
RAB28-201ENST00000288723 INO80BQ9C086 356 aaPredicted RBP22.8■■□□□ 1.24
RAB28-201ENST00000288723 PRRC2BQ5JSZ5 2229 aaKnown RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 SFPQP23246 707 aaKnown RBP eCLIP22.79■■□□□ 1.24
RAB28-201ENST00000288723 PRPHP41219 470 aa22.79■■□□□ 1.24
RAB28-201ENST00000288723 ATP2C1P98194 919 aaPredicted RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 HAUS3Q68CZ6 603 aa22.79■■□□□ 1.24
RAB28-201ENST00000288723 CATSPER4Q7RTX7 472 aa22.79■■□□□ 1.24
RAB28-201ENST00000288723 ASAP3Q8TDY4 903 aa22.79■■□□□ 1.24
RAB28-201ENST00000288723 SNX29Q8TEQ0 813 aa22.79■■□□□ 1.24
RAB28-201ENST00000288723 INTS4Q96HW7 963 aaKnown RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 DBR1Q9UK59 544 aaKnown RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 MRPL42Q9Y6G3 142 aaKnown RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 COL4A4P53420 1690 aaPredicted RBP22.79■■□□□ 1.24
RAB28-201ENST00000288723 POU3F3P20264 500 aaPredicted RBP22.78■■□□□ 1.24
RAB28-201ENST00000288723 PDCP20941 246 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 SYT1P21579 422 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 CTNNB1P35222 781 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 FAM43BQ6ZT52 329 aaPredicted RBP22.78■■□□□ 1.24
RAB28-201ENST00000288723 RNF169Q8NCN4 708 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 RAB34Q9BZG1 259 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 GPRC5CQ9NQ84 441 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 TMEM161AQ9NX61 479 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 KIAA1024Q9UPX6 916 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 ARL2P36404 184 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAB28-201ENST00000288723 CMTR2Q8IYT2 770 aaKnown RBP22.78■■□□□ 1.24
RAB28-201ENST00000288723 SNX21Q969T3 373 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 SAMD11Q96NU1 681 aa22.78■■□□□ 1.24
RAB28-201ENST00000288723 PIN4Q9Y237 131 aaKnown RBP22.78■■□□□ 1.24
RAB28-201ENST00000288723 TBKBP1A7MCY6 615 aa22.77■■□□□ 1.24
RAB28-201ENST00000288723 ASAP2O43150 1006 aa22.77■■□□□ 1.24
RAB28-201ENST00000288723 ECHDC2Q86YB7 292 aa22.77■■□□□ 1.24
RAB28-201ENST00000288723 CLP1Q92989 425 aaKnown RBP22.77■■□□□ 1.24
RAB28-201ENST00000288723 POLR3FQ9H1D9 316 aaPredicted RBP22.77■■□□□ 1.24
RAB28-201ENST00000288723 DDX19AQ9NUU7 478 aaKnown RBP22.77■■□□□ 1.24
RAB28-201ENST00000288723 ARHGEF35A5YM69 484 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 VWA3AA6NCI4 1184 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 GLRA2P23416 452 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 BMPR1AP36894 532 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 GPM6BQ13491 265 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 CAPSQ13938 189 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 MXD4Q14582 209 aaPredicted RBP22.76■■□□□ 1.23
RAB28-201ENST00000288723 BRAPQ7Z569 592 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 SRGAP1Q7Z6B7 1085 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 MMTAG2Q9BU76 263 aaKnown RBP22.76■■□□□ 1.23
RAB28-201ENST00000288723 ELAC1Q9H777 363 aaKnown RBP22.76■■□□□ 1.23
RAB28-201ENST00000288723 POLD4Q9HCU8 107 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 HCSTQ9UBK5 93 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 XIRP2A4UGR9 3374 aa22.76■■□□□ 1.23
RAB28-201ENST00000288723 A0A0U1RQF3 1178 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 H3BNC9 293 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 ZRSR1Q15695 479 aaKnown RBP22.75■■□□□ 1.23
RAB28-201ENST00000288723 LONRF3Q496Y0 759 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 KRT79Q5XKE5 535 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 TWF2Q6IBS0 349 aaKnown RBP22.75■■□□□ 1.23
RAB28-201ENST00000288723 PADI6Q6TGC4 694 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 BHMT2Q9H2M3 363 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 CHST12Q9NRB3 414 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 DACT1Q9NYF0 836 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 MUTP22033 750 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 PHKA2P46019 1235 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 RNF19AQ9NV58 838 aa22.75■■□□□ 1.23
RAB28-201ENST00000288723 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
RAB28-201ENST00000288723 NLRC5Q86WI3 1866 aa22.74■■□□□ 1.23
RAB28-201ENST00000288723 E9PMD0 336 aa22.74■■□□□ 1.23
RAB28-201ENST00000288723 PTENP60484 403 aa22.74■■□□□ 1.23
RAB28-201ENST00000288723 FAM173BQ6P4H8 233 aa22.74■■□□□ 1.23
RAB28-201ENST00000288723 ATF7P17544 494 aaPredicted RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 TFDP1Q14186 410 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 SKIV2LQ15477 1246 aaKnown RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 HSCBQ8IWL3 235 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 AGPAT5Q9NUQ2 364 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 TYW1Q9NV66 732 aaKnown RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 STK24Q9Y6E0 443 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 C5orf67F2Z3F1 127 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 INO80B-WBP1J3KQ70 363 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 CSPG5O95196 566 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 CYP11B2P19099 503 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 HOXA11P31270 313 aaPredicted RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 RESTQ13127 1097 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 SF3A1Q15459 793 aaKnown RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 SPOUT1Q5T280 376 aaKnown RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 KCNK18Q7Z418 384 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 ZNF598Q86UK7 904 aaKnown RBP22.73■■□□□ 1.23
RAB28-201ENST00000288723 MCPH1Q8NEM0 835 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 CASD1Q96PB1 797 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 PLIN2Q99541 437 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 LMCD1Q9NZU5 365 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 RWDD3Q9Y3V2 267 aa22.73■■□□□ 1.23
RAB28-201ENST00000288723 VCANP13611 3396 aa22.72■■□□□ 1.23
RAB28-201ENST00000288723 GRM6O15303 877 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms