RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 EXOSC10Q01780 885 aaKnown RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 TTC25Q96NG3 672 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 C11orf70Q9BRQ4 267 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 ATP8A1Q9Y2Q0 1164 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 PMLP29590 882 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 KIF12Q96FN5 646 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 FAM217BQ9NTX9 383 aaPredicted RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 KBTBD13C9JR72 458 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 HIP1RO75146 1068 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 YWHABP31946 246 aaKnown RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 PPARGP37231 505 aaPredicted RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 TTC31Q49AM3 519 aaPredicted RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 FMR1NBQ8N0W7 255 aaPredicted RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 KATNAL1Q9BW62 490 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 MED4Q9NPJ6 270 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 ASNSD1Q9NWL6 643 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 MIF4GDA9UHW6 222 aaKnown RBP19.86■□□□□ 0.77
PCDH1-201ENST00000287008 HSPH1Q92598 858 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
PCDH1-201ENST00000287008 A8MXQ7 604 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 GH1P01241 217 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 AP3M2P53677 418 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 EPHB4P54760 987 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 MAP3K21Q5TCX8 1036 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 CPB1P15086 417 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 PCK1P35558 622 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 VEPH1Q14D04 833 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 PASD1Q8IV76 773 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 GPD1LQ8N335 351 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 BAG5Q9UL15 447 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 PIN4Q9Y237 131 aaKnown RBP19.85■□□□□ 0.77
PCDH1-201ENST00000287008 ARHGAP42A6NI28 874 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 CELF2O95319 508 aaKnown RBP19.85■□□□□ 0.77
PCDH1-201ENST00000287008 KSR1Q8IVT5 923 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 GPRC5AQ8NFJ5 357 aa19.85■□□□□ 0.77
PCDH1-201ENST00000287008 RBM41Q96IZ5 413 aaKnown RBP19.85■□□□□ 0.77
PCDH1-201ENST00000287008 TJP3O95049 919 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 GYS1P13807 737 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 SCFD2Q8WU76 684 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 VPS39Q96JC1 886 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 SPDYE2BA6NHP3 402 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 TRAPPC3O43617 180 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 SPDYE6P0CI01 402 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 NNMTP40261 264 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 IL9RQ01113 521 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 TIPINQ9BVW5 301 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 SUCLA2Q9P2R7 463 aaPredicted RBP19.84■□□□□ 0.77
PCDH1-201ENST00000287008 PRKCBP05771 671 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 PDHBP11177 359 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 GUCY1A2P33402 732 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 GPC5P78333 572 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 JADE1Q6IE81 842 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 ENOSF1Q7L5Y1 443 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 SPDYE1Q8NFV5 336 aaPredicted RBP19.84■□□□□ 0.77
PCDH1-201ENST00000287008 MTFR1LQ9H019 292 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 INTS9Q9NV88 658 aaKnown RBP19.84■□□□□ 0.77
PCDH1-201ENST00000287008 MAGEB2O15479 319 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 IGDCC4Q8TDY8 1250 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 RSRC1Q96IZ7 334 aaKnown RBP19.84■□□□□ 0.77
PCDH1-201ENST00000287008 ACAP3Q96P50 834 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 CCSER1Q9C0I3 900 aa19.84■□□□□ 0.77
PCDH1-201ENST00000287008 M0QYV0 167 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 SLMAPQ14BN4 828 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
PCDH1-201ENST00000287008 TRIM42Q8IWZ5 723 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 FBXL13Q8NEE6 735 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 SCAF8Q9UPN6 1271 aaKnown RBP19.83■□□□□ 0.77
PCDH1-201ENST00000287008 TBX3O15119 743 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 DHX9Q08211 1270 aaKnown RBP19.83■□□□□ 0.77
PCDH1-201ENST00000287008 MXD4Q14582 209 aaPredicted RBP19.83■□□□□ 0.77
PCDH1-201ENST00000287008 TRIP13Q15645 432 aaPredicted RBP19.83■□□□□ 0.77
PCDH1-201ENST00000287008 TTC13Q8NBP0 860 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 PKNOX2Q96KN3 472 aa19.83■□□□□ 0.77
PCDH1-201ENST00000287008 KIAA0391O15091 583 aaKnown RBP19.83■□□□□ 0.76
PCDH1-201ENST00000287008 PPP2R3CQ969Q6 453 aa19.83■□□□□ 0.76
PCDH1-201ENST00000287008 LCMT1Q9UIC8 334 aa19.83■□□□□ 0.76
PCDH1-201ENST00000287008 KCNJ6P48051 423 aa19.83■□□□□ 0.76
PCDH1-201ENST00000287008 KLHL8Q9P2G9 620 aaPredicted RBP19.83■□□□□ 0.76
PCDH1-201ENST00000287008 HPCAL4Q9UM19 191 aa19.83■□□□□ 0.76
PCDH1-201ENST00000287008 MT-ND3P03897 115 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 COG7P83436 770 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 PDIA6Q15084 440 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 AFG1LQ8WV93 481 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 CHMP6Q96FZ7 201 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 TNIP3Q96KP6 325 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 PFASO15067 1338 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 SATB1Q01826 763 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 GABPB1Q06547 395 aaPredicted RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 SKIV2LQ15477 1246 aaKnown RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 INTS5Q6P9B9 1019 aaKnown RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 CHST13Q8NET6 341 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 NUDT12Q9BQG2 462 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 GINM1Q9NU53 330 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 TRIM49P0CI25 452 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 TRIM49CP0CI26 452 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 GNA15P30679 374 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 IFNAR2P48551 515 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 PPP4CP60510 307 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms