RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 RASSF2P50749 326 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 C6orf89Q6UWU4 347 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 KIAA0825Q8IV33 1275 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SYN2Q92777 582 aaPredicted RBP15.3■□□□□ 0.04
VPS26B-201ENST00000281187 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 CTNNAL1Q9UBT7 734 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 HAO1Q9UJM8 370 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 NOL4O94818 638 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 GHRP10912 638 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 MAPK7Q13164 816 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SEMA3FQ13275 785 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 MTM1Q13496 603 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SEPT2Q15019 361 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SCFD1Q8WVM8 642 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 DLGAP2Q9P1A6 1054 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS26B-201ENST00000281187 USH1CQ9Y6N9 552 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 PODXLO00592 558 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 PSMC2P35998 433 aaKnown RBP15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SLC8A3P57103 927 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
VPS26B-201ENST00000281187 FLT1P17948 1338 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 C21orf2O43822 256 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 STRN3Q13033 797 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ODR4Q5SWX8 454 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 FAM228AQ86W67 206 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ZNF34Q8IZ26 560 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ALG13Q9NP73 1137 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■■■□ 23.6
VPS26B-201ENST00000281187 RABGAP1Q9Y3P9 1069 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 IKBKGQ9Y6K9 419 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 LTN1O94822 1766 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 EXOC1LA0A1B0GW35 172 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 RSPH10B2B2RC85 870 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 RSPH10BP0C881 870 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 MMP14P50281 582 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 CTTNQ14247 550 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ITIH4Q14624 930 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 TMEM154Q6P9G4 183 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 NT5DC3Q86UY8 548 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 NAF1Q96HR8 494 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 TTC7AQ9ULT0 858 aaPredicted RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 ATRNO75882 1429 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 A0A0G2JND7 137 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 CHRNA3P32297 505 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 WLSQ5T9L3 541 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 C6orf163Q5TEZ5 329 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 EPM2AIP1Q7L775 607 aaPredicted RBP15.29■□□□□ 0.04
VPS26B-201ENST00000281187 AIPL1Q9NZN9 384 aa15.29■□□□□ 0.04
VPS26B-201ENST00000281187 DDX3XO00571 662 aaKnown RBP eCLIP15.28■□□□□ 0.042e-15■■■■■ 36.8
VPS26B-201ENST00000281187 CLDN3O15551 220 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 LGR5O75473 907 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 AKAP3O75969 853 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 CCDC174Q6PII3 467 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 RNF207Q6ZRF8 634 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 CYTH2Q99418 400 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 IQCGQ9H095 443 aaKnown RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 AGAP1Q9UPQ3 857 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 TXNDC9O14530 226 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 MGRN1O60291 552 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 SOX5P35711 763 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 RPL21P46778 160 aaKnown RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 DHX34Q14147 1143 aaKnown RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 MFSD14BQ5SR56 506 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 C4orf33Q8N1A6 199 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 BSDC1Q9NW68 430 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 SCOCQ9UIL1 159 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 MYH6P13533 1939 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 SNX3O60493 162 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 UFL1O94874 794 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 GNAT1P11488 350 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 KRT17Q04695 432 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 TCP10Q12799 353 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 ZNF572Q7Z3I7 529 aaPredicted RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 ANKRD35Q8N283 1001 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
VPS26B-201ENST00000281187 LRRC4CQ9HCJ2 640 aa15.28■□□□□ 0.04
VPS26B-201ENST00000281187 ERVK-5Q9HDB9 667 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms