RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 C3orf20Q8ND61 904 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
SCLT1-201ENST00000281142 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
SCLT1-201ENST00000281142 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 GNA11P29992 359 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 ADAM9Q13443 819 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 WDR90Q96KV7 1748 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 UCHL3P15374 230 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 SLCO1A2P46721 670 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 MTMR3Q13615 1198 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 TMEM266Q2M3C6 531 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 TRPM4Q8TD43 1214 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 ATXN2LQ8WWM7 1075 aaKnown RBP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 KCTD10Q9H3F6 313 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 STXBP5LQ9Y2K9 1186 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 ASTN2O75129 1339 aaPredicted RBP12.3□□□□□ -0.44
SCLT1-201ENST00000281142 SCN4AP35499 1836 aa12.3□□□□□ -0.44
SCLT1-201ENST00000281142 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 KCNJ2P63252 427 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 NFIAQ12857 509 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 NT5DC3Q86UY8 548 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 NSMCE1Q8WV22 266 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PRCCQ92733 491 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CUL5Q93034 780 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 FMO2Q99518 471 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PRMT1Q99873 361 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 SEC63Q9UGP8 760 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 A8MUI8 341 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.442e-13■■□□□ 13
SCLT1-201ENST00000281142 CES2O00748 559 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 BUB1BO60566 1050 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 GCKP35557 465 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 EIF1ADQ8N9N8 165 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CCDC63Q8NA47 563 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 HAS1Q92839 578 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 TXLNGYQ9BZA5 131 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 IKZF4Q9H2S9 585 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 SNX24Q9Y343 169 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 POTECB2RU33 542 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PLCG2P16885 1265 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 NR2F2P24468 414 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PLTPP55058 493 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PSMD2Q13200 908 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 PICALMQ13492 652 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 CCDC50Q8IVM0 306 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 KIF9Q9HAQ2 790 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 KIAA1024Q9UPX6 916 aa12.29□□□□□ -0.44
SCLT1-201ENST00000281142 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
SCLT1-201ENST00000281142 HGSO14964 777 aaPredicted RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 PPFIA2O75334 1257 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 GHRP10912 638 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 PON1P27169 355 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 RASGEF1CQ8N431 466 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 SCAF8Q9UPN6 1271 aaKnown RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 BTNL10A8MVZ5 291 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 CCDC188H7C350 402 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 VIMP08670 466 aaKnown RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 ABCB4P21439 1286 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 SLC8A1P32418 973 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 ARMC2Q8NEN0 867 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 EPS8L3Q8TE67 593 aaKnown RBP12.28□□□□□ -0.44
SCLT1-201ENST00000281142 AGAP11Q8TF27 550 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 SEC14L1Q92503 715 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
SCLT1-201ENST00000281142 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms