RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PPP1R16BQ96T49 567 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 CYP26A1O43174 497 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 FAM153BP0C7A2 387 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 LMNB1P20700 586 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TRIP13Q15645 432 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 FAM153CQ494X1 144 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 IFT74Q96LB3 600 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TRIM51Q9BSJ1 452 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 FAM153AQ9UHL3 310 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 WNT10BO00744 389 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ITGA4P13612 1032 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 BAG6P46379 1132 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 DLG4P78352 724 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 XXYLT1Q8NBI6 393 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 KAT5Q92993 513 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 POLR3CQ9BUI4 534 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 MAP2K7O14733 419 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SART1O43290 800 aaKnown RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 LIG4P49917 911 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 GOLGA5Q8TBA6 731 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SLC20A1Q8WUM9 679 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 MAGOHBQ96A72 148 aaKnown RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ASTN1O14525 1302 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 TTI1O43156 1089 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 MARK3P27448 753 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 SLCO1A2P46721 670 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 CDR1P51861 262 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 CDK17Q00537 523 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 MICALL2Q8IY33 904 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 DYDC1Q8WWB3 177 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 TRIM66O15016 1216 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 OSTNP61366 133 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 BFSP1Q12934 665 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 THAP2Q9H0W7 228 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 PLAAQ9Y263 795 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 PEX10O60683 326 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 FECHP22830 423 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 LENG9Q96B70 501 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 WRAP73Q9P2S5 460 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 EXOC7Q9UPT5 735 aa12.84□□□□□ -0.35
SLC13A3-201ENST00000279027 ASTN2O75129 1339 aaPredicted RBP12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 E7EVH7 732 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 MYZAPP0CAP1 466 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 ITGB5P18084 799 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 SEZ6Q53EL9 994 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 TAS2R14Q9NYV8 317 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.369e-11■■■□□ 17
SLC13A3-201ENST00000279027 PLCB3Q01970 1234 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 NCAPG2Q86XI2 1143 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 UBL4BQ8N7F7 174 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 ZSWIM2Q8NEG5 633 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 ZIM3Q96PE6 472 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 GANQ9H2C0 597 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 ASIC3Q9UHC3 531 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 PLSCR1O15162 318 aa12.83□□□□□ -0.36
SLC13A3-201ENST00000279027 STRN3Q13033 797 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms