RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 ERCC3P19447 782 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 TRAF1Q13077 416 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 RPS6KA1Q15418 735 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 ACTRT1Q8TDG2 376 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 GJA10Q969M2 543 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 GMCL1Q96IK5 515 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 OLFML3Q9NRN5 406 aa14.08□□□□□ -0.16
C9orf3-201ENST00000277198 MKI67P46013 3256 aaKnown RBP14.08□□□□□ -0.16
C9orf3-201ENST00000277198 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 PEX10O60683 326 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 ASNSP08243 561 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 CYP3A4P08684 503 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 MYBP10242 640 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
C9orf3-201ENST00000277198 GAP43P17677 238 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 PON1P27169 355 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 NPEPPSP55786 919 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 PTK2Q05397 1052 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 CERKLQ49MI3 558 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-201ENST00000277198 CFAP58Q5T655 872 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 FOXR1Q6PIV2 292 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 TMEM179Q6ZVK1 233 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 EPB41L5Q9HCM4 733 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 EIF3DO15371 548 aaKnown RBP eCLIP14.07□□□□□ -0.16
C9orf3-201ENST00000277198 ZEB2O60315 1214 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 FTCDO95954 541 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 CUL1Q13616 776 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 ZYXQ15942 572 aaKnown RBP14.07□□□□□ -0.16
C9orf3-201ENST00000277198 PRR16Q569H4 304 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 C17orf99Q6UX52 265 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 TSEN2Q8NCE0 465 aaKnown RBP14.07□□□□□ -0.16
C9orf3-201ENST00000277198 LENG9Q96B70 501 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 TRERF1Q96PN7 1200 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 SMARCAL1Q9NZC9 954 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 NAGPAQ9UK23 515 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
C9orf3-201ENST00000277198 MYH7BA7E2Y1 1941 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 CCDC188H7C350 402 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 PIK3CDO00329 1044 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 KIF4AO95239 1232 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 EYA4O95677 639 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 MUTP22033 750 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 CARSP49589 748 aaKnown RBP14.06□□□□□ -0.16
C9orf3-201ENST00000277198 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 EPHA7Q15375 998 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ABCB5Q2M3G0 1257 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ALKBH5Q6P6C2 394 aaKnown RBP14.06□□□□□ -0.16
C9orf3-201ENST00000277198 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-201ENST00000277198 FBXO11Q86XK2 927 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 C10orf67Q8IYJ2 551 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 SYCE1Q8N0S2 351 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 SCFD2Q8WU76 684 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ZIM3Q96PE6 472 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 ZHX3Q9H4I2 956 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 AGTPBP1Q9UPW5 1226 aa14.06□□□□□ -0.16
C9orf3-201ENST00000277198 SRRM3A6NNA2 597 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 EBAG9O00559 213 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 NR3C1P04150 777 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 FERP16591 822 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 HOXD13P35453 343 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 STAT3P40763 770 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 CASP5P51878 434 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 BACE1P56817 501 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 JAM2P57087 298 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 ARID5AQ03989 594 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 BTNL9Q6UXG8 535 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 SLFN11Q7Z7L1 901 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 PPM1EQ8WY54 764 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 KRT12Q99456 494 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 NFU1Q9UMS0 254 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 TRIM66O15016 1216 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 TBCAO75347 108 aaKnown RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 AKAP3O75969 853 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 SLC9A1P19634 815 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 HSPA9P38646 679 aaKnown RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 PABPC4Q13310 644 aaKnown RBP eCLIP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 TTMPQ5BVD1 217 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 LRIG3Q6UXM1 1119 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 SLC35C1Q96A29 364 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms