RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CCDC189A1A4V9 331 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ZSCAN5CA6NGD5 496 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 LGR5O75473 907 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CYP2C8P10632 490 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 RINT1Q6NUQ1 792 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SH2D3CQ8N5H7 860 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TACO1Q9BSH4 297 aaKnown RBP15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PCDHA13Q9Y5I0 950 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ESYT2A0FGR8 921 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 OPLAHO14841 1288 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PSMD2Q13200 908 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MIEF2Q96C03 454 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 STK17AQ9UEE5 414 aa15.33■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MESDQ14696 234 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 DAB2IPQ5VWQ8 1189 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 BTBD6Q96KE9 485 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 BAIAP2L1Q9UHR4 511 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MRPL42Q9Y6G3 142 aaKnown RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MYO3BQ8WXR4 1341 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GOLGA4Q13439 2230 aaKnown RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TNFAIP3P21580 790 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 HPDP32754 393 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 THOC1Q96FV9 657 aaKnown RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 FNBP1Q96RU3 617 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 LARSQ9P2J5 1176 aaKnown RBP15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 UBR3Q6ZT12 1888 aa15.32■□□□□ 0.04
TNFRSF11A-201ENST00000269485 DENND3A2RUS2 1198 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PALMO75781 387 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 NR3C2P08235 984 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PRELPP51888 382 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CCNHP51946 323 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GIT2Q14161 759 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TRIP13Q15645 432 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 KNOP1Q1ED39 458 aaKnown RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SESTD1Q86VW0 696 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 LRRC27Q9C0I9 530 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 FAM49AQ9H0Q0 323 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 A0A087X0T9 212 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SLITRK3O94933 977 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 FAM228BP0C875 321 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 DLG4P78352 724 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 UGCGQ16739 394 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TMEM130Q8N3G9 435 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 KRT12Q99456 494 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ARHGAP20Q9P2F6 1191 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 COPS5Q92905 334 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
TNFRSF11A-201ENST00000269485 EME2A4GXA9 379 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 ZBED6P86452 979 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SYCP2LQ5T4T6 812 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MICALCLQ6ZW33 695 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 RSRC2Q7L4I2 434 aaKnown RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 THAP9Q9H5L6 903 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 KMT5AQ9NQR1 393 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 LIMA1Q9UHB6 759 aaKnown RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CHUKO15111 745 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CD19P15391 556 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 TMOD1P28289 359 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 IRAK1P51617 712 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 USP11P51784 963 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 APTXQ7Z2E3 356 aaKnown RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 PSMD1Q99460 953 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 MYO7AQ13402 2215 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 AP3B2Q13367 1082 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 SWT1Q5T5J6 900 aaKnown RBP15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 VPS36Q86VN1 386 aa15.3■□□□□ 0.04
TNFRSF11A-201ENST00000269485 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms